Phaseolus vulgaris (common bean): 137823937
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Entry
137823937 CDS
T03093
Name
(RefSeq) autophagy-related protein 13a isoform X1
KO
K08331
autophagy-related protein 13
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
137823937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvu04131
]
137823937
03029 Mitochondrial biogenesis [BR:
pvu03029
]
137823937
Membrane trafficking [BR:
pvu04131
]
Autophagy
Autophagosome formation proteins
ULK complex
137823937
Atg1 complex
137823937
Mitochondrial biogenesis [BR:
pvu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
137823937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
137823937
NCBI-ProteinID:
XP_068485393
LinkDB
All DBs
Position
8:complement(52535413..52540351)
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AA seq
593 aa
AA seq
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MDLQNNMQPELGKLEQIVYQFLLKCLHIILDSRVPLLRPHDRSGDLSMGSRVRRSDKWFN
LALGDRPSALDNLNFWHRNLMDPMIIDIILVHDVAGSSVETVIERWVVQYDCPRVVAPQT
GDITSSYKKTYQKSIVLFRALYSQMRLLPAQKIFRQLSTCSHSCNFDIVYKVSSFSDPFS
RAEGGMMEEHNFTPIEALPGRLCVSVTFRTALSEFSLECSASLPTKIITDYVGSPNTDPL
RSFPVSDKGVRPTSFPLRGIAPPSSSPLDRPHSWTSGFHRAAPFVLNHPYVGSPPVYRGS
SKPYDYPSPPIDNYGIRLPNHRILNQQRSTSYDEYQLSPPFSSSPSPSPPTYLCPINPMQ
THMRPGTAPVTIPHSVIGKSTSNLSSNFSDPSRNSLPPLSPRRNDGSSHESPSGIKSLRK
LEASRTGQKFVRDSKDDSGRFSGLLSSSGSPRIGFSRTSSRLSFQDELDDGDFSCPFDVD
DVDAPDVQYSQNVDGKSGAEMTSTSMPIGKKSQDAAVGVLVHMLRTAPPLRQDPSCYSSH
SPKAEFDGGVATASGFFMPRKTADALEELRGYREMRDLLLSKSGTRILNKHKA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggatttgcagaacaacatgcagcctgaattgggcaagttggaacaaattgtttatcaa
tttcttctgaagtgcttgcacataattttggactcaagggtgcctttgttacgcccccat
gatagaagtggtgacttgtccatgggttctcgtgtgaggaggagtgacaagtggtttaac
ttggcattaggtgataggccttctgctctggataacttgaacttctggcacaggaattta
atggatccaatgataattgacattatactagttcatgatgtggctggttcttctgttgag
acagtcatagagaggtgggttgttcagtatgattgtccccgtgtggtggctcctcaaaca
ggtgacattactagctcttacaagaagacataccagaagtcaatagtacttttccgagct
ctttattctcaaatgaggcttctccctgcgcaaaagatatttaggcagttaagcacatgt
agtcatagttgtaattttgatattgtttacaaggtctcttcatttagtgatcctttctct
agggcagaagggggaatgatggaagaacataatttcactcctattgaggctcttcctggt
cgcctttgtgtatctgtgaccttccgaactgcactatctgagttcagccttgagtgttca
gcttcattgccaaccaaaataattactgattatgttggaagccccaatactgaccctttg
aggtctttccccgtctcggataagggtgttcggcccacttcctttccactaagagggata
gcaccaccatcttcttcaccacttgatcgtcctcacagctggactagtggcttccataga
gcagctccttttgtactgaaccatccttatgttggctccccaccagtgtatcgaggttct
tccaagccctatgactatccatccccacctattgataattatggcatcagattacccaac
catcgaatactgaatcagcaaagatctactagttatgatgagtatcaactttctcctcca
ttctcatcttcaccatctccatcgccacctacatacttgtgtcctatcaatccaatgcaa
actcacatgcgccctggaactgcccctgtaactatacctcattcagtaataggcaaaagc
actagtaatctttcttctaatttttcagatcctagtcgaaattctctgcctcctttatct
cccagaaggaatgatggttcatcccatgagtctccatctggaatcaagtcactcaggaaa
ttagaagcttcaaggactggtcaaaagtttgtcagagatagcaaggatgattcagggagg
ttctcaggattgttatcctcaagtggctcaccacgcattggattttcaagaacctcaagt
agattatcatttcaggatgagttggatgatggcgacttttcgtgtccttttgatgttgat
gatgttgatgcaccagatgttcaatacagtcagaatgtggatgggaagagtggtgcagag
atgacttcaacatcaatgccaattggaaaaaaatcacaagatgctgctgttggtgttctt
gtgcacatgctcaggacagcgcctcccttgcgccaagatccaagctgctattcatcccat
tccccaaaggccgagtttgatggaggagttgccactgcttctggtttcttcatgccacga
aagacagcagatgcacttgaagagctcaggggttacagagagatgagagaccttcttctt
tccaagagtggcactaggatcctgaacaagcataaagcttga
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