Phaseolus vulgaris (common bean): 137825558
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Entry
137825558 CDS
T03093
Name
(RefSeq) LOW QUALITY PROTEIN: SNF2 domain-containing protein CLASSY 4-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
137825558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvu03400
]
137825558
DNA repair and recombination proteins [BR:
pvu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
137825558
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
137825558
NCBI-ProteinID:
XP_068487354
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Position
8:complement(29210512..29215148)
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AA seq
1224 aa
AA seq
DB search
MSEMNRGAPIACRTRNNKRKLFENALLMSRKRKKAREQEAIFSNGVGASVKVEPGSVASL
TSSAALAMNCEIVSERGSQRLGEHMGDPIVISDGDDGSEAEEGLRDPESDIFWVKVESKS
EEDEGSLVLGDKVGNFGDDDYGREYENPVALSTDEDEDDHGDLLVSSTESEDDETSDEDF
LVTNDGDDDGFETEDSTSDDSDGDDGCCCGGDVRGVHRKTVKGMVRKMESDTESSGICKR
KGERKGNDQVDEEEQWIGADCTSATSSKSEIYKKEGKHATHKHEAKRVQNVIADFEVCGV
HGGNSGCSLPSEVLENMKKSDRGDQSATLQQQIGDSTVVEKSGSKKHINAIDRVNTDVIE
RKENQHNKGTGLRSVSFSPKNQEKIGDSAKIVMEKDKEGKHKYWFNSNNREKVRVVDDET
GDKELHELLRMPSTLKNKCYKFFTECFMGKSNSVKDDSNKLDEKDDDVAEGQTQPLVSRQ
PIPFHCGFMNEEEPIEKSEQEKELDVLWGEMDMLLRVEEIGTQVNNIGTNEARENEESPA
SKCKHDTIFNEQIGIYCRWCGWIETEIKYITPPFVDSERYGGRRVASDGGNISKLDRALL
NEYDDDLEEIWSHNEGTVWDLIPNIKQSLYPHQQEGFEFIWTNLGGTIDLAKLKTVNPCN
EGGCIISHAPGTGKTRLTMVFLQTYLQLFPKCLPVIIAPSNILLTWEDELRKWNLGIPFH
NLNSTELSGKEQVINEVDWSGNQRQNKDAIRMVKLCSWYKEKSILLISYNLYEKLAGATS
EGDGEKDKNNGKIEKKKHARTREYIESGMGKVLRDYPGLLVLDEGHTPRNQNSYIWKVLS
ESRTQKRILLSGTPFQNNFLELYNILCLMKPSFPDSIPQELKKFCQSRLMHRRKASKDMS
WEPVSSRNPADEKIKQLNLLMNPFVHVHDGSILQKNLPGLRECVLVLKPDTFQQETLESI
EYAQNVLNFEHKLALVSVHPSLFLSCSLSKKEESIVDKGKLEKVRLNPYAGVKTKFLIEF
IRLCDAVNEKVLVFSQFIDTLNLIKDQLESAFNWTLGMEVLYMYGKLDQKQKQFLINSFN
EANSQAKVLLASIKASSEGISLVGASRVVILDVVWNPSVERQAICRAYRLGQKKVVFTYH
LLAQGTPECTKYCKQAEKNRLSELVFSNRNAESDKIKRRGVMLEDFEDRVLDLLVQHEKL
KEMIGECIIQPKKRXFGDFGPLIL
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaatgaatcgaggggctcccattgcttgcaggacgcgtaacaacaagagaaag
ttgtttgagaatgctttactaatgagtcggaagaggaagaaggcgcgggaacaagaagct
attttctccaatggtgtaggtgcaagtgtgaaagttgaacctgggtccgtcgcttcgttg
acatcttctgctgctcttgcaatgaactgtgaaatagtatcggaacgtggttctcagcgt
ctgggagagcatatgggcgaccctattgtaatcagtgatggtgatgatggcagtgaggct
gaagaggggttgagggatcctgagagcgatatattttgggttaaagtggaaagcaagagt
gaggaggatgaagggtctttagtgttgggtgataaagttgggaactttggcgatgatgac
tatggccgtgaatatgaaaacccggttgcattgtcgactgatgaagatgaggatgatcat
ggtgatttgcttgtgtcttcaactgagagtgaggatgatgagacgagcgatgaagatttt
ctggttaccaatgatggcgatgatgatgggtttgagactgaagactcaacgagtgacgac
agtgatggcgatgatggttgttgttgtggtggtgatgtgaggggggttcacaggaagacg
gtgaagggtatggtgagaaagatggagagtgatactgaaagcagtggaatttgcaaaagg
aaaggtgaaaggaaaggtaatgatcaggtagatgaggaggagcaatggattggcgctgat
tgtactagtgcgacctctagtaaatctgagatttacaagaaggaaggaaaacatgcaaca
cataaacatgaagcaaagagagtgcaaaatgtcattgctgattttgaagtctgtggtgtt
cacgggggaaattcaggttgttctctgccttctgaagtcctggagaatatgaaaaaaagt
gatagaggtgatcaaagtgcgacattgcagcaacagataggagattcaactgtggtcgag
aagagcgggagcaaaaaacatatcaatgccattgaccgggtgaatactgatgtaattgaa
agaaaagagaatcaacacaacaaaggaacaggtctgaggagtgtttcttttagtccaaaa
aaccaagagaagataggagattctgctaaaattgtaatggaaaaggacaaggaagggaaa
cataaatattggtttaatagcaataaccgtgagaaggtcagggtggtggatgatgaaact
ggtgacaaagagttgcatgaactcctaaggatgccatctacattgaaaaacaaatgttat
aaattttttactgaatgttttatgggcaagagtaattcggttaaggatgattcaaataag
ttggatgaaaaggatgatgatgttgctgagggtcagactcagccattagtttctaggcag
ccaatcccttttcattgtggctttatgaacgaagaagaacctatagaaaagtcagagcaa
gagaaggagttagatgtgttgtggggtgaaatggatatgttgcttcgagttgaagaaatt
gggacccaggttaataatatagggacaaatgaagcaagagaaaacgaagaaagtccagcc
tcgaagtgcaagcatgacactatttttaacgagcagattggaatatattgtagatggtgt
ggttggatcgagactgaaatcaaatatatcacgccaccatttgtggattctgaaagatat
ggtggtagaagggtggcatctgatggaggtaacatctcgaaattggatagggctctgttg
aatgagtatgatgatgacttggaggaaatttggtctcacaatgaaggcacagtttgggac
cttattcctaacattaaacaaagcttgtatcctcatcaacaagaagggtttgagtttatt
tggacaaacttgggaggaactattgacctcgccaaattgaagactgttaacccatgcaat
gaaggtggctgcattatttctcatgctcctggaacaggaaagacgaggttgaccatggtg
tttcttcagacatatttgcaattgtttccaaagtgtctacctgttatcattgctccttcc
aacatattgcttacttgggaagacgagctgagaaagtggaacttaggaattccattccat
aacttgaacagtactgaattatcaggaaaggaacaagtcatcaatgaagttgattggtct
ggcaatcagaggcagaataaggatgccatacggatggtgaagttgtgttcatggtacaaa
gagaagagcattctattaatcagctacaacttgtatgagaagctagcaggggccacgtct
gagggtgatggggaaaaagataagaataatggaaagatcgagaaaaagaaacatgcaagg
acaagggagtacattgaaagtggaatgggaaaggttctgcgtgactatcctggtttgcta
gtacttgacgaaggacacactcctcggaatcagaatagttatatttggaaggttctttct
gaaagtagaactcagaagcgaattcttctctcagggactccttttcagaacaactttttg
gaactttacaatattttgtgcttaatgaaaccatcctttcctgacagcatcccacaagaa
ctcaagaagttttgccaaagtagacttatgcaccgaaggaaagcatcaaaagacatgagt
tgggaacctgtttcttctcgaaatccagctgatgaaaaaataaaacagctaaatttgctg
atgaacccctttgttcatgttcacgacggtagcattcttcagaagaaccttcctgggttg
agagaatgtgtgttggttctgaagccagacacttttcagcaagaaactctagagagcatt
gaatacgctcaaaacgttctaaactttgaacacaagttggccttggtctcagtccatcca
tcccttttcctcagctgctctttgtcaaaaaaagaagaatccattgttgacaagggtaag
ttggaaaaagttagattgaacccttatgcaggagtgaaaaccaaatttctgatcgagttt
ataagactatgtgatgcagttaatgagaaagtccttgttttcagccaattcattgatact
ttaaacttaatcaaggaccagctcgagtcagccttcaattggactttggggatggaagtg
ttatatatgtatggcaagcttgaccaaaaacaaaaacagttcctcattaatagtttcaat
gaagcaaatagccaagcaaaggtgttacttgcttctataaaagcatcttctgaaggcatt
agcttagttggagcttcaagggtcgtgattcttgatgttgtttggaatccctcagtcgaa
aggcaagctatttgccgagcatacagactaggacaaaagaaggttgttttcacttatcat
ctacttgcccagggcacccctgaatgcaccaaatactgcaaacaagcagaaaagaaccgg
ttatctgaactggttttctcaaatagaaatgctgaaagcgataagatcaagagaagggga
gtaatgcttgaggattttgaagatagagttcttgatctcctggttcagcatgaaaaactc
aaggagatgattggtgaatgtataatccaacctaagaagagangatttggagattttggg
cccctgatcctttga
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