KEGG   Phaseolus vulgaris (common bean): 137825564
Entry
137825564         CDS       T03093                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1-like
  KO
K14962  COMPASS component SWD2
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    137825564
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvu03019]
    137825564
   03036 Chromosome and associated proteins [BR:pvu03036]
    137825564
Messenger RNA biogenesis [BR:pvu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     137825564
Chromosome and associated proteins [BR:pvu03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     137825564
    COMPASS/SET1 complex (yeast)
     137825564
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WD40 Beta-prop_EML_2 EIF3I WDR55 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 NBCH_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_SPT8 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_WDR75_1st KNTC1_N Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 137825564
NCBI-ProteinID: XP_068487363
LinkDB
Position
11:48728032..48733031
AA seq 334 aa
MGGTQTEREEKVSLELSEEILQSMEVGMAFKDYNGRISSLDFHRASSYLVTASDDESIRL
YEVTSGTCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGH
HDRVVSLSLCSRKDCFISGSLDRTVLLWDQRAEKCQGLLHVQGRPAISYDDQGLVFAVAF
GGFIRMFDARKYEKGPFEIFSVGGDTSDANVVKFSNDGSLMLLTTADGHIHVLDSFRGTL
LSTYNVTPVSCNSTLEASFSPEGMFVISGSGDGSIYAWSVRSGKEVASWRSATSDTGPPV
IKWAPGSLMFATGSSELSFWIPDLSKLGSYVGRK
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgggagggacacaaacggagagagaagagaaggtgtctttggaactcagtgaagaaatt
cttcagagtatggaagtaggaatggccttcaaagactataatggtagaattagttccttg
gactttcacagggcttccagttatctagtaactgctagtgatgatgaatccattcgactg
tatgaggttaccagtgggacatgtttgaagacaattaatagcaagaagtatggggttgac
ctggtttgcttcacatctcatcctacaactgtcatatactcttcaaaaaatggttgggat
gaatctttgcggcttctatcgttacatgataacaagtatttgagatatttcaaaggtcac
catgacagggttgtgtcgctaagcttgtgctctcggaaagactgctttatatctggttct
ttagatcgaactgttttactatgggatcaaagggctgaaaagtgccagggactgttacat
gtacaaggaaggcctgctatatcatatgacgatcaagggcttgtctttgcagttgccttt
ggaggattcataagaatgtttgatgctcgcaaatatgaaaagggtccctttgagatattt
tctgttgggggagatacttctgatgcaaatgttgtgaaatttagtaatgatgggagtctc
atgcttttaacaacggcagatgggcatattcatgtacttgattcatttcgtggcacactt
ttatccacatataatgtcacacctgtctcatgcaactccacattagaagcttctttcagc
ccggagggaatgtttgtaatatctggttctggggatggaagcatatatgcatggagtgtt
cgaagtggcaaagaagttgcaagttggaggagtgcaacttctgataccggacctcctgta
ataaaatgggctcctggaagtcttatgtttgctactggatcatctgagttgtcattctgg
attccagatttgtctaagttgggatcttatgttggaagaaagtag

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