Phaseolus vulgaris (common bean): 137825614
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Entry
137825614 CDS
T03093
Name
(RefSeq) nibrin homolog
KO
K10867
nibrin
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
137825614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvu03032
]
137825614
03400 DNA repair and recombination proteins [BR:
pvu03400
]
137825614
DNA replication proteins [BR:
pvu03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
137825614
DNA repair and recombination proteins [BR:
pvu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
137825614
BRCA1-C complex
137825614
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
Nbs1_C
PTCB-BRCT
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
137825614
NCBI-ProteinID:
XP_068487426
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All DBs
Position
8:59133673..59141892
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AA seq
557 aa
AA seq
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MVWGLFPVDPLSGEDNYYIFKTGIYKVGRKGCDVIITKDKGVSRVHAEIIVNKMNLVNPL
PNECSHLSPSIHIRDCSKYGTFISKNVGPKKKVHELPNKQTPLEDGDLVSFGTGSATYKF
CHVPLVFFICCSNKVDLQEKISSIGASFTHTLGEGCTHVLVDQLMPLKKDLVDAVVAKKS
CVLQNWLEFFAEKNISTEIPSCHSYIPTVSVDGESIKIADPRSREDCMKGYTFLLESEHL
YKFRDQLKSLLEVAGAKVVSAGDFCSNSQASNYGEDNRVVCVIPEGPACKTNLFDKLSSL
LRVSEMDILCAAFSGQLDLSTFKSPCILVSSSCSTDETIVADSDTEVETATSARSTEALS
NDNNVKCGKTEEIYDDSCTLDKRKHDSIEASSDDVLTRLHDIKRAKTETSLDGASVRSHA
TSFSNDNVGVKVKKDKVDDNETGNSDVVYSQHLIVRDTNIRSSVSTAPDSSFPNFKCFRK
AHTQSGNSFDNLVPFAKYPYKDSDCGDDEMSELVKEEKRRKKMEAVADDLFNNEKTRKRG
TGGSRGTVGSLRSILSS
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggggactcttccccgttgatcctctttcaggtgaagataactactatattttc
aaaactggaatttacaaagttggtcgaaaaggttgtgatgtgataatcactaaagataaa
ggtgtttctcgggttcatgcagaaataattgttaataaaatgaacctggtaaatccttta
ccaaatgaatgttctcatttgtcacccagtatacatattagagattgctccaagtatggg
acatttattagcaagaatgttgggcccaagaaaaaagttcatgagctaccaaacaagcaa
acgccactagaggatggcgaccttgtttcttttggcactggtagtgctacctacaagttt
tgccatgtacccctcgtttttttcatctgttgctcaaataaagtggatcttcaagagaaa
atttcatcaattggtgctagttttactcataccttaggtgaagggtgcacacatgtgctg
gtagatcaactcatgccgttgaagaaggatcttgttgatgctgttgtggcaaaaaaatct
tgtgttctccaaaattggcttgagttttttgcagaaaagaatatcagcaccgaaattcct
agctgtcattcatatattccaacagtgtcagtggacggagaatctattaaaattgctgac
cccaggtcgcgtgaagattgcatgaaaggatacacatttttgttggaatctgagcatttg
tataaatttcgggatcagctaaaatctttattggaggtggctggtgcaaaagttgtttcc
gctggagatttttgttcaaatagtcaagcttcaaattacggagaggataatcgtgtggtt
tgtgtcatcccagaaggaccagcatgcaagactaatctttttgataaactgagttccttg
cttagagttagtgagatggatatactttgtgctgctttcagtggacagctagatctgtct
acctttaaatcaccatgcatacttgtttcgtcttcatgctctacagatgagacaattgta
gcagattcagatactgaagttgaaacagccacatcagcgcgctcaactgaggcattaagc
aacgacaataatgtaaaatgtggaaaaacagaagaaatatatgatgattcttgcactttg
gataagagaaaacatgatagtatagaggcatcctcagatgatgttttaaccagattgcat
gacattaaacgtgcaaaaacagaaacatccttggatggtgcttctgtcagatcacatgct
accagcttcagtaacgataatgttggtgtcaaagtaaagaaagacaaggttgatgataat
gaaactggaaattcagatgttgtttatagccaacatttaattgttcgagatacaaacata
cggagtagcgtaagcactgcaccagacagcagttttccaaattttaaatgtttcagaaag
gcacacactcaatctggtaatagctttgacaatcttgttccatttgcaaaatatccatac
aaggattctgactgcggggatgacgaaatgtctgagttagtgaaggaggaaaaaaggcga
aagaaaatggaagctgtcgcagatgacctatttaataatgagaagacaaggaaacgaggc
acaggtggttcacgaggcactgttggttctcttcgtagcattctttcttcatga
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