KEGG   Phaseolus vulgaris (common bean): 137825807
Entry
137825807         CDS       T03093                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
pvu  Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pvu03009]
    137825807
Ribosome biogenesis [BR:pvu03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    137825807
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz EIF3I Beta-prop_TEP1_2nd WDR55 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_IP5PC_F Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_WDR75_1st WDR54 Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_WDR75_2nd WD40_MABP1-WDR62_1st Beta-prop_LRRK2 Beta-prop_VPS8 Beta-prop_SCAP Ge1_WD40 Beta-prop_WDR19_2nd
Other DBs
NCBI-GeneID: 137825807
NCBI-ProteinID: XP_068487696
LinkDB
Position
8:complement(2136817..2140733)
AA seq 448 aa
MEVVLASSSVDGGIGCWDLHTGAEQLRYKSCLSPSHGLVSVGSRFIASSQLRETSATSGS
VLFWSWSKPQVEVKSFPAEPIKPLASNHPGTFIVGGALSGDIYFWEVETGRLLKKWRAHF
RAVTCMVFSEDDSLLISGSEDGTVRVWSLFMIFDDFRGQQANNLYEYSFSGHTLRVTDVV
IGNGGCNAIIVSASEDRTCKVWSLSRGTLLRNIVFPSVIDSIALDPAEHVFYAGSRDGKI
YIAALNAVSVATNNYGMHIIGSFSNHSKAVTCLAYGMSENLLISGSEDGMVRVWNARTRN
IVRMFKHAKGPVNNIIVVRRENSSNHISSNVQTSSRKQGANLPPPLEKYANSIDEDSDMS
TMVSLVGGSSSVVPQYISSQQISNYIKELQHQGLSAASEMETEKLKHDYQMSMQMTNQWK
KMYENLNKFCVQELLDGSQATTLDENQN
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggaggttgttttggcgtcgtcgtctgttgacggcggaatagggtgctgggaccttcac
accggcgcggagcagctccgctacaaatcttgcttgtccccttctcacggccttgtctcc
gtcggttctcgcttcatcgcctcctctcagcttcgagaaacttcagcaacatctggttct
gttctcttctggtcctggtccaagcctcaagttgaagtgaagagctttcctgctgaacct
attaagccccttgcttctaatcacccgggaaccttcattgttggtggagctttgtctggt
gatatttacttttgggaagttgaaaccggtagattgcttaaaaagtggcgtgcacatttt
agggcggttacttgtatggttttttctgaagatgactcgctgttgatatctggttctgaa
gatggaaccgtaagagtttggtctctcttcatgatattcgatgatttcagagggcagcag
gcaaataatctttatgagtatagtttttcaggacacaccctgcgcgtgactgatgttgtt
attggtaatggagggtgcaatgcaattattgtgtcagcttcagaggatcgaacttgcaag
gtatggagcttatctaggggaacactactaagaaatatagtattcccttcagttatcgat
tccattgcattggatccagctgagcacgtcttttatgctggcagtagagatggaaagata
tatattgctgcacttaacgctgtaagcgttgctactaataattatgggatgcatatcatt
ggctctttttctaaccacagcaaggcagttacttgcttagcatatggcatgagtgagaat
ttgttaatatccgggtcagaggatggaatggttcgtgtttggaatgcaagaactcgtaac
attgtccgcatgttcaaacatgctaaagggcctgtaaataatattatcgttgttagacga
gaaaactctagtaatcacatatcttctaatgtacaaacatcatcaagaaagcaaggggct
aatttaccccctccattggaaaaatatgcaaattcaatagatgaagactcagatatgagc
actatggtcagtcttgtgggtggaagcagttctgtggttcctcaatacatcagttctcaa
cagatatctaattacattaaggaacttcagcatcaagggttatctgctgcttctgaaatg
gagacggagaaactaaaacatgattaccaaatgtcaatgcaaatgactaaccaatggaag
aaaatgtatgaaaacttaaataaattttgtgtacaagaactgttggatggcagtcaagct
acaaccttagatgaaaatcagaattaa

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