Phaseolus vulgaris (common bean): 137825888
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Entry
137825888 CDS
T03093
Name
(RefSeq) uncharacterized protein
KO
K12589
exosome complex component RRP42
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137825888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
137825888
Messenger RNA biogenesis [BR:
pvu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
137825888
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
137825888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
137825888
NCBI-ProteinID:
XP_068487789
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All DBs
Position
8:62725520..62728963
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AA seq
286 aa
AA seq
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MVGLSLGEKHFIQGGIAHDLRCDGRKRLAYRPILVETGVIPQANGSARVRIGATDVIASI
KAELGKPSLLQPDKGKASIYIDCSSTAEPAFEGRGGDELAAELSIALQDCLLGGKSGAGA
GIDLSSLIVVEGKICWDLYIDGLVVSSDGNLLDALAAAIKAALCNTGIPRVQVAAGASND
EQPEVDVSDEEFLQFDTSGVPVIVTLTKIGRHYIVDATSEEESQMSSAVSISVNRQGHIC
GIAKRGGVGLDPSIILDMISVSKHVSEELINKLDSEIASAEAEEES
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggtgggtttatctcttggagaaaaacatttcatacaaggtggcattgctcatgatctt
cgatgtgatggtagaaagagattggcatatcgaccaatcctggttgaaactggagtgatt
ccccaggcaaatggttctgctcgagtcagaattggcgccacagatgtcattgccagtatt
aaggctgaacttggaaaaccaagcttgttgcaacctgacaaaggaaaggcctctatatat
attgattgcagttcgactgcagagccagcctttgagggtagagggggtgatgagttggca
gcagaactgtcaattgctcttcaagactgtctcttgggtggtaaaagtggagcaggtgct
ggcattgacctttcatcacttattgtcgttgaaggaaaaatttgttgggatctctacatt
gatgggcttgttgttagttcagatggaaatttgttggatgccctagctgctgccattaag
gctgctttgtgcaatacaggtattccaagagtccaagttgctgctggagcatcaaatgat
gagcaaccagaagttgatgtaagcgacgaagagtttctgcagtttgacacatctggagtc
cctgtcatagttacactaactaagattgggaggcactatattgtggatgcaacatcagaa
gaggaatcacaaatgagctctgctgtttccatctctgttaataggcaagggcacatctgt
ggcatagccaaacgaggaggtgtagggctggatccaagcatcattcttgatatgatatct
gtttctaagcatgtaagcgaggaattaataaacaaattggattcagaaattgcttctgct
gaagctgaagaggagtcatga
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