Phaseolus vulgaris (common bean): 137826014
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Entry
137826014 CDS
T03093
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
KO
K14829
pre-rRNA-processing protein IPI3
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvu03009
]
137826014
Ribosome biogenesis [BR:
pvu03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
137826014
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_C
WD40_CDC20-Fz
EIF3I
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
PROPPIN
Motif
Other DBs
NCBI-GeneID:
137826014
NCBI-ProteinID:
XP_068487957
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Position
11:complement(47292330..47294136)
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AA seq
489 aa
AA seq
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MKRQKYLKKHYKTKPQVVVFTHPSSCFLISLLKQKMSSSSSSSSSNELILTSSPDGPIMV
YDTVSPTAVTQFSSSRSPSRGLAIVGRRLLAASHVSPDTGAGSINIYNWHGSGVFRNFPV
PEPVAPLIATSDGAFLLGGGISGSVVSLSSSSGDVIRSIAVHSSPVSSLHLTDDGSLLIS
GSEDGTIVIVPSFKIVGGGSEEEEEDEEDLVMNKWKAHSDSVTDLKSVMKTLVSCSSDCT
CKFWNLGDRGILMRTVAFPCCISGVALDSTETAFYAGGADGYVYNGSMKVVGEACEVRNW
ARVHGGSVVALGLVNGERGLVSAAEDGSVWMWDVEKGEVIMVFGDELITVSDMIVIKGNG
GGFGDGKGSNNNFAVGKGSGSFISSGLCEEHMLRTLNKITELEEVKDVVFHDKKKAIDML
ETVIQMYERLLELILKEVTKAIVEEEGEDAAEEEKDEKDEKAEKDEKDEKAEKDGKDEKA
EEEQGKDDN
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagacaaaaatacctaaaaaaacactataaaaccaaaccacaagtagttgtattc
acacacccttcttcttgtttcctcatttcccttctcaaacagaaaatgtcttcttcttct
tcctcctcctcctccaatgaactcatcctcactagctcccccgacgggcccatcatggtg
tacgacaccgttagccccaccgccgtcacgcagttctccagcagccgatcgccgtctcgt
ggcctcgccatagtgggccggagactgctggctgcctcacacgtgtccccagacacgggt
gcaggctccatcaacatctacaactggcacggttctggtgtgttccgtaacttccctgtg
cctgaacccgttgcccctctcattgctacctccgatggagcgtttctccttggtggtggc
atctcagggagtgttgtatctctttcaagttcttccggggatgtcatcagatcaattgct
gtacactccagtccagtttctagtcttcatctcaccgatgatgggtcactccttatttca
ggtagtgaagatgggactattgttattgtccctagctttaagatcgttggtgggggttcc
gaggaggaggaggaggatgaggaagacttggtcatgaacaaatggaaggcacattctgat
tccgtgactgatttgaagtctgtgatgaagactttggtttcttgctcatcagactgcaca
tgcaagttttggaatctgggggaccgcgggatccttatgcggactgtggcattcccatgc
tgcatttctggggttgccttggattccactgagacagcgttttacgctggtggagcagat
gggtatgtttataatgggagtatgaaagtggtgggtgaggcttgtgaggtgaggaactgg
gctagggttcatggtgggtcagttgtggcattgggtttggtgaatggagagaggggtttg
gtgtctgctgcagaagatgggagtgtgtggatgtgggatgttgagaaaggagaagtcata
atggtgtttggagatgaactgataaccgttagtgacatgattgtgatcaagggaaatggt
ggtgggtttggagatggaaaggggagtaataataattttgcagttgggaaaggtagtggt
tccttcatttcttctgggttatgtgaggagcacatgcttagaaccctaaacaaaatcaca
gagcttgaggaggtgaaggatgttgtgtttcatgacaagaaaaaggccattgacatgctg
gaaactgtgattcaaatgtatgagagacttttggagcttatccttaaggaagttaccaaa
gccattgtagaagaagaaggagaagatgctgctgaagaagagaaagatgagaaagatgag
aaagctgagaaagatgagaaagatgagaaagctgagaaagatgggaaagatgagaaagct
gaagaggaacagggaaaagatgataattaa
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