Phaseolus vulgaris (common bean): 137826732
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Entry
137826732 CDS
T03093
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03030
DNA replication
pvu03410
Base excision repair
pvu03420
Nucleotide excision repair
pvu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137826732
03410 Base excision repair
137826732
03420 Nucleotide excision repair
137826732
03430 Mismatch repair
137826732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvu03032
]
137826732
03400 DNA repair and recombination proteins [BR:
pvu03400
]
137826732
DNA replication proteins [BR:
pvu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
137826732
DNA repair and recombination proteins [BR:
pvu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
137826732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
PTCB-BRCT
RCF1-5-like_lid
AAA_19
Rad17
AAA_30
nSTAND3
BRCT_2
Gp44_lid
Sigma54_activ_2
RuvB_N
AAA_5
AAA_assoc_2
AAA_33
AAA_18
RNA_helicase
AAA_14
TsaE
NTPase_1
RsgA_GTPase
AAA_17
AAA_16
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
137826732
NCBI-ProteinID:
XP_068488984
LinkDB
All DBs
Position
11:10797867..10808859
Genome browser
AA seq
938 aa
AA seq
DB search
MSDIRKWFMKSHDKGNNAAPSKPSNQPKPSSDKPQPEKNVAGGQESSGRRVTSKYFNTNK
QKVKEEKETQELPAKRKNVKDSEDTPEPKRVHEDVGDDSVLPTNKKKLAEATPTKKLKSG
SGRGIPKKSVVLEESDEDDDKGAVSAVKSAGRGGGGRGAPGRGRGGGRGGFMNFGERKDP
PHKGEKEVPEGAPNCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCD
EDIGGRKSEKAKELGTSFLTEDGLFDMIRASKPAKSPSQAEKKPVNKAVAVAPKVSPKPL
VKVPLSSRSPSKQAKPVAATTIESSVMWTEKYRPKDPKDIIGNQSLIVQLRNWLKAWNEQ
FSDTGNKKKGKKQNDSVLKKAVLLSGTPGIGKTTSAKLVCEQLGFQAIEVNASDSRGKAD
SKIEKGISGSKTNSVKELVTNESIGANMERSKISKSVLIMDEVDGMSAGDRGGVADLIAS
IKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMDVAKAEGLQVNEIAL
EELAERVNGDVRMAVNQLQYMSLSMSVINYDDIRQRFLTNAKDEDISPFTAVDKLFGFNA
GKLRMDERINLSMSDPDLVPLLIQENYINYKPSLAGKDDNGIKRMNLIARAAESIADGDI
VNVQIRRYRQWQLSQASCTATCIIPASLLHGQREILEQGERNFNRFGGWLGKNSTMGKNF
RLLDDLHVHILASRESSSGRDTIRMEYLTLILKRLTEPLRTLPKAEAVQQVVEFMNTYSI
SQEDFDTIVELSKFKGHPNPLDGIQPAIKSALTKAYKEQSKSRVVRVADQITLPGVKKAP
KKRIAAILEPAEEGGEKGEGDTSDQSEEENTSDTEELEGIAKGEKLQSDLQSWNSKATEV
QLELKGTGNSSAKKASGGRGKAASTSGKKAAQAPKRKR
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatataaggaagtggttcatgaaatcacatgacaagggaaacaatgccgctccc
tccaagccttccaatcaacccaagccttcttcggataaaccccagcccgagaaaaatgtg
gctggaggtcaagaaagttcagggaggagggtaactagcaaatattttaacacaaacaag
caaaaggtgaaagaggagaaggaaacgcaggagttacctgctaaaagaaagaatgtgaag
gacagtgaagatacaccagagcctaagagagttcatgaagatgttggagatgattctgtc
ttgcccaccaataaaaagaagttagctgaggccactccgacaaaaaaattgaagagtgga
tcaggtcggggtattcccaaaaaatctgtagttttggaagaaagtgatgaagatgatgac
aaaggtgctgtttctgctgttaaatctgctggaaggggtggtggtggaagaggagcacct
gggagaggtagagggggcggtaggggtggattcatgaattttggagaaagaaaagatccc
ccacacaaaggagaaaaggaagtccctgaaggtgctcctaactgtttagctggcttgact
tttgtgatcagtggaacactggatagtttggaacgtgaagaagctgaagatttgattaaa
cgccatggtggccgtgtcactggatcagtcagcaagaaaacgaattatctgttatgtgat
gaagatattggggggcggaagtctgaaaaggccaaagagctaggaacgtccttcctcacg
gaggatggattgtttgatatgattcgtgcatcaaaacctgctaaatctccttcacaagca
gaaaagaaacctgtgaataaggctgttgcagtagcaccaaaagtttctccgaaaccccta
gttaaggttcctctgtcttcacgctcaccttctaagcaggctaagccagtggctgctact
actattgaatcttctgtgatgtggacagagaaatatcgacctaaagatccaaaggatatc
atagggaaccagtcacttattgttcaacttcgtaattggttgaaagcttggaacgagcaa
ttttcagacactggtaacaaaaaaaagggaaaaaagcaaaatgactctgttttgaaaaaa
gctgtcttgttaagtggaacccctggtatagggaaaacaacttcagcaaagttggtctgt
gagcagcttggtttccaagccatagaggtaaatgctagtgatagccgtggaaaagctgat
agcaaaattgagaaaggaattagtggaagcaagacaaattctgttaaggagcttgtaacc
aatgagtctattggtgctaatatggagcggtccaagatttccaaatctgtgctcattatg
gatgaggttgatgggatgtcagctggtgataggggtggtgttgctgatcttattgctagc
attaagatatcgaaaattcctattatctgcatttgcaatgaccgttacagccagaaactt
aaaagccttgtgaactactgtttgcttctaagttttcggaagcctacaaagcaacagatg
gcaaagaggttgatggatgttgcaaaggctgaaggccttcaagttaatgagattgcactt
gaggaactagcagaaagagttaatggggatgtgcgaatggcagtaaaccagttacagtat
atgagcctctctatgtctgttatcaactatgatgacattagacaacgctttcttaccaat
gcaaaggatgaagacatttcaccattcacggctgttgataagctttttggttttaatgct
gggaagttgagaatggatgagaggataaatcttagcatgagtgatcctgatcttgttcct
cttcttattcaggaaaattatattaattataaaccaagcttggctggtaaggatgacaat
ggcataaaacgcatgaacctgattgcccgtgctgctgagtctattgctgatggggatata
gtgaatgttcagattcgcagatatcgacagtggcagctctctcaagctagttgtacagca
acctgcataattcctgcatcattgttgcacgggcaaagagaaatacttgaacagggagaa
cgaaatttcaaccggtttggtggatggcttgggaagaactcgacaatgggcaaaaacttt
aggcttttggatgatcttcatgttcacattcttgcttctcgtgaatctagttcaggaagg
gataccattcgcatggaatatctcactcttattcttaaacgattgactgaacccctacga
accctgcctaaggctgaagcggttcaacaagttgtggaattcatgaatacatactctatc
agtcaggaagattttgatactatagtagagttatcaaaattcaagggtcatcctaatcca
ctagatggcatacagcctgccattaagtcagctttgacaaaagcctacaaagagcaaagc
aaatctcgggtggttcgagttgccgaccaaataacacttcctggtgtaaagaaggcccct
aagaagcggattgctgctatacttgaaccagccgaggaaggaggcgaaaaaggggaaggt
gacacctcggaccagagtgaagaagagaacacgtctgatacagaagagctggaaggcatc
gccaagggcgagaagctgcaatccgatcttcaaagctggaattcaaaagccacggaagta
cagttggaactgaagggaacgggtaattcaagtgccaagaaggcatcgggtggtagaggt
aaagctgcttctacatctgggaagaaggctgctcaagctccaaaaagaaaaaggtga
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