Phaseolus vulgaris (common bean): 137826772
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Entry
137826772 CDS
T03093
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137826772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
137826772
Messenger RNA biogenesis [BR:
pvu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
137826772
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
137826772
NCBI-ProteinID:
XP_068489014
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Position
11:complement(7499627..7504319)
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AA seq
254 aa
AA seq
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MAGKGGATPATYSPSLTVDKKKPPLFKEDWVRPDGRGFHQCRPAFFRTGAVNAASGSAYA
EVGNTKVIVSVFGPRESKKAMMYSDTGRLNCNVSFTTFATPVRGQGSDHKEYSAMLNKAL
EGAIILESFPKTTVDVFALVLESSGSDLPVVISCASLALADAGIMMYDLVASVSVSSFSK
NLVIDPILEEENCQDGSLMITCMPSRYEITQLTVTGEWSSPRINEGMQLCLDACAKLAKI
MRSCLKEAASDSRE
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggccggcaaaggtggggcgactccggcgacatactcgccgtctctgacagtcgataaa
aagaaaccaccgcttttcaaggaagattgggttcggcccgatggccgcggtttccaccag
tgcagacccgcatttttcaggactggtgctgtgaatgcagcatctggatctgcttatgcc
gaggttggaaataccaaggtcattgtatctgtatttgggccaagagagagcaagaaggca
atgatgtacagtgatacagggcgtttgaattgcaatgtcagctttacaacatttgcaact
ccagtgcgagggcagggttcagaccacaaagagtacagtgcaatgcttaataaagctttg
gagggtgcaataatactggaaagtttccccaagacaactgtggatgtttttgcattggtg
ctagaatctagcggcagtgatctcccagttgtcatatcgtgtgctagccttgccctggcg
gatgctggaataatgatgtatgatcttgttgcctcggtttctgtgtcaagttttagtaag
aaccttgtcattgatcctattttggaggaggaaaactgccaagatggtagcttaatgatt
acctgtatgccttctcgctatgaaatcacccaactcaccgttaccggggaatggtcttct
ccgaggattaacgagggaatgcagctgtgcttggatgcttgtgcaaagctagcgaagatt
atgagatcatgtttgaaagaagctgcttcggattccagggagtag
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