Phaseolus vulgaris (common bean): 137827085
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Entry
137827085 CDS
T03093
Name
(RefSeq) protein CHROMATIN REMODELING 5
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvu03021
]
137827085
03036 Chromosome and associated proteins [BR:
pvu03036
]
137827085
Transcription machinery [BR:
pvu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
137827085
Chromosome and associated proteins [BR:
pvu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
137827085
SLIK complex
137827085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
137827085
NCBI-ProteinID:
XP_068489398
LinkDB
All DBs
Position
8:54550451..54568380
Genome browser
AA seq
1759 aa
AA seq
DB search
MAFFRNFSNDTVSHGVMEDKSQGQNANRTHRSVGNECTDATSSEKEFDMNMEAQYESDGE
PVGSGRLQTEATADDGDAVKESTLQTAGNKTARMGRWGSSFWKDCGQMGPQNGSESGQES
KSGSDYRNADGSEDNSLDGRAGRLDSDDDDGQKEEGKGPRGLSDVPAEEMLSDEYYEQDG
EEQSDSIHYGGIKKPSESNSWPQRMSTTANRTLHRNSRFSDDAEEDDDDGDNDNDGDDAD
YEEEDEADEDDPDDADFEPATTGHAGNKDKDWEGEGSDEDDDSDENIVVSDDDETFYAKR
PKGRQRGKIGQNMKSTRDRKVYAASGRQRRVKSSFEDNESTTEDSDNDSDEDFKSSKKRS
VHVRKNNGRSSSAIGFSMRSNEVRTSSRTVRKVSYVESEESEEVDEGKKKKSQKEEIDED
DSDSIEKVLWHQPKGTAEDAERNNRSTEPVLMSHLFDSEIDWNEMEFLIKWKGQSHLHCQ
WKSFAELQNLSGFKKVLNYTKKIMEDMRYRRTISREEIEVNDVSKEMDLDIIKQNSQVER
IIADRISKDNSSNVIPEYLVKWQGLSYAEATWEKDIDIAFAQHAIDEYKAREAAMAAVQG
KMVDSQRKKSKASLRKLEEQPEWLKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGK
TVQSVSMLGFLQNAQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIIYVGTRASREVCQ
QYEFYNEKRPGKPLKFNALLTTYEVVLKDKAFLSKIKWSYLMVDEAHRLKNSEAQLYTTL
SEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFRSKDEFVQNYKNLSSFNENELANLH
TELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQVS
LLNIVVELKKCCNHPFLFESADHGYGGDSGSSDNSKLERIVFSSGKLVILDKLLVRLHET
KHRVLIFSQMVRMLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLS
TRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDIL
ERAKKKMVLDHLVIQKLNAEGRLEKKEAKKGGSYFDKNELSAILRFGAEELFKEERNDEE
SKKRLLSMDIDEILERAEKVEEKEPDGEQGNELLSAFKVANFCNDEDDGSFWSRWIKPDS
VFQAEEALAPRSARNIKSYAEVDPSERTNKRKKKEPEPPERVQKRRKAEYSAPAVPMIEG
ACVQVRNWSYGNLSKRDALRFSRSVMKYGNESQIDLIAAEVGGAVGAAPTGAQIELFNAL
IDGCTEAVELGNLDVKGPLLDFFGVPVKASDLVTRVQQLQLLAKRIDRYEDPIAQFRVLS
YLKPSNWSKGCGWNQIDDARLLIGIYFHGFGNWEKIRLDERLGLTKKIAPVELQHHETFL
PRAPNLKDRANALLEQELAVLGVKNANSKVGRKPSKKDRDNIISLVRGQEKKKKSGSVNV
QIRKDRFQKPQKVESIVKEEGEMSDNEEVYEQFKEVKWMEWCQDVMVEEMKTLKRLHRLQ
QTSANLPKEKVLSKIRNYLQLLGRRIDQIVLEHEEEPYKQDRMTVRLWKYVSTFSHLSGE
RLHQIYSKLRQEQDEAGVGPSHGNGSVSVSFTRNGNPFRVHMERQRGLKNMSTYQMPEAV
DNSGKSEAWKRRRRAESDNQFQGQPPPQRTASNGLRITDPNSLGILGAGPSDKRFANEKP
YRTQPGGFPSRQGFSSGIK
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atggctttcttcaggaacttttcaaatgatacagtatcacatggcgtcatggaagataaa
agccaaggacagaatgcaaatagaactcatagatcagtaggtaatgaatgtactgatgca
acttctagcgagaaagaatttgatatgaacatggaggcacagtatgagagtgatggcgaa
ccagttggttctggtagactgcaaactgaggcaacagccgatgatggagatgctgtgaaa
gaatcaaccttgcagactgctggtaataaaacagctaggatgggaaggtggggttcaagt
ttttggaaggactgcgggcaaatgggccctcaaaatggttctgaatctgggcaggagtca
aaaagtggatcagattatagaaatgcagatgggtctgaagataattcattggatggaaga
gcaggaagattagactcggatgatgatgatgggcaaaaggaggaaggaaaaggtccaaga
ggtctctctgatgttcccgctgaagaaatgttgtcggatgagtattatgagcaggatggg
gaagagcaaagtgattcaatacattacggtggtataaaaaagccttctgaatcgaattca
tggccacaaaggatgtcaaccaccgcaaatagaactttgcacaggaattcgaggttttca
gatgatgccgaagaagatgacgacgacggagataatgataatgatggtgatgatgctgat
tatgaagaagaggatgaagcagatgaagatgatcctgatgatgcagactttgagcctgcc
acaactggtcatgctggaaataaggataaagattgggaaggtgaaggctctgatgaagat
gatgacagtgatgaaaatatagttgtctcagatgatgatgaaactttctatgctaaacgg
cctaaaggaaggcaacgaggtaagattggacaaaacatgaaatctaccagagatcgcaaa
gtgtatgctgcatctggtcggcaaagaagagttaaatcatcttttgaggacaatgagtca
acaacggaggattctgacaatgacagtgatgaggatttcaaaagctcaaaaaagcgaagt
gttcatgttcgcaaaaataatggtcgttcttcttcggctataggtttttctatgcgcagc
aatgaagttcgcacttctagtaggactgttaggaaggtatcatatgtggaaagtgaagaa
agtgaagaagttgatgaaggaaaaaagaagaagtcccaaaaggaagaaattgacgaggat
gatagtgactccattgaaaaggtgctttggcatcaaccaaagggcacagctgaagatgcg
gaaaggaataatcgttcaacagagcctgttttaatgagtcacttgtttgattcagaaatt
gattggaatgagatggaatttttgataaaatggaaagggcaatcacatttgcactgtcag
tggaagtcttttgctgagctgcaaaacctcagtggttttaagaaggttttgaattataca
aagaaaataatggaagacatgaggtacagaaggacaatttcaagagaggagattgaggtc
aatgatgttagtaaggagatggatttagatattatcaaacagaacagtcaggtggaaagg
ataattgcagatagaatcagcaaagataattctagcaatgttattccagaatacttggtc
aagtggcaaggactatcttatgctgaagcgacttgggaaaaggacattgatattgctttt
gcccaacatgctattgacgagtataaggctcgtgaggctgctatggcggcagttcaagga
aagatggtagattctcagcgtaagaaaagtaaagcaagtttgcgaaagcttgaggaacaa
cctgagtggttgaagggtggaaagcttcgtgattatcaacttgagggtctgaattttctt
gttaacagttggagaaatgatacaaatgtcattttagctgatgaaatgggcctcgggaaa
actgttcagtcagtatcaatgcttggttttttacagaatgcccagcaaatccatggtcct
tttcttgtagttgttccactctccactttatcaaattgggccaaagaattcaggaagtgg
cttcctgatatgaatattatcatatatgttggtactcgtgctagtcgagaggtttgtcaa
cagtatgaattttataatgaaaaaagaccagggaagccattaaaattcaatgcacttttg
acgacatatgaagtagttttgaaggataaggcttttctgtccaagatcaaatggagttac
ctgatggtggatgaggctcataggctaaaaaatagtgaggcacagttgtatacgacactt
tcagaatttagcaccaagaacaagttgcttatcactggtactcctctacagaacagtgtg
gaagaactatgggccttgcttcatttccttgaccctgacaagttcaggagcaaggatgaa
tttgttcaaaattataagaatctgagttcttttaatgaaaatgagcttgcaaatcttcat
acagaattgagacctcacatacttcgaagagttatcaaagatgtggagaaatcattgccc
cctaaaattgagcgtatacttcgggttgaaatgtctcctcttcagaaacagtattataag
tggattttggaacgtaattttcacaatttgaacaaaggagttcgggggaatcaggtttct
cttctaaatattgtggtggaattaaagaagtgctgcaaccatccgttcttgtttgaaagt
gctgatcatggctatggtggggactcagggagtagtgataacagtaaactagagagaatt
gtttttagcagcggcaagcttgtcatacttgataagcttcttgttcgattgcatgaaacc
aagcatcgtgtattgattttctctcagatggttagaatgttggatatactgggagaatat
atgtcacttcgaggatttcaatttcagaggcttgatggcagtacaaaagctgagctgcga
cagcaggcaatggatcatttcaatgcacctggtagtgatgatttttgcttccttctttca
acacgggcaggaggtttgggtataaaccttgccacagcagacactgttataatatttgat
tctgattggaatcctcaaaatgacctgcaggcaatgagtagagctcatagaattgggcaa
caagaagttgttaacatatatagatttgtgacaagtaaaagtgttgaggaagatattctg
gaacgtgctaagaagaaaatggttctggatcacttggtgattcaaaaattaaatgcagag
ggtagactggagaagaaagaagccaaaaaaggaggaagttattttgacaaaaatgagctg
tctgcaatcttacgatttggagctgaggagctttttaaggaagaaagaaatgatgaagag
agcaagaaacgactcttaagtatggatatagatgaaattcttgaaagagcagagaaggtg
gaagagaaagaacctgatggggaacagggaaatgagttattaagtgcctttaaggttgcc
aatttttgcaatgatgaagatgatgggagtttctggagccgatggataaagccggattct
gtgttccaagcagaggaagctcttgctcctcgttctgctagaaatattaaaagctatgca
gaagttgatccatccgaaagaactaataaaagaaaaaagaaggaacctgaaccacctgaa
cgagttcagaaacggcggaaagcagagtattctgctcctgctgtaccaatgattgaagga
gcatgtgttcaagtgagaaattggtcatatgggaatttatctaaaagagacgcacttcgt
ttttcgcgttcagttatgaaatatggcaatgagagccaaattgacttaattgctgccgag
gtgggtggtgctgttggtgcagctccaactggagcacagattgaactattcaatgctctt
attgatggctgtacagaggcagtggaacttggaaatttagatgtgaaggggcctctgctg
gatttttttggtgtccctgtgaaggcgagtgatctagttacccgtgtccaacaacttcaa
cttctggcaaagcgcattgatcgatacgaagatcctattgcacaatttcgtgttctgtca
tatctcaaaccatcaaactggtccaaaggttgtggatggaatcaaattgatgatgctaga
ttgcttattggaatatatttccatgggtttggtaattgggaaaagataagattagatgaa
agacttggcctcacgaaaaaaattgcacctgtagaacttcaacaccatgaaactttctta
ccacgagctccaaatttaaaagatcgtgctaatgcccttttggagcaagaacttgcggtt
cttggtgtgaaaaatgccaatagcaaagttggacggaagccttcaaagaaagatagagat
aatatcatttcattggtacgtgggcaggagaaaaagaaaaaatcaggttctgttaatgtc
caaataagaaaggatagatttcaaaaaccccagaaggttgaatctatagtaaaggaagag
ggtgaaatgtctgacaacgaggaagtgtatgagcagttcaaggaggtgaaatggatggaa
tggtgtcaagatgtaatggttgaagaaatgaaaactttgaaacgtcttcacaggttgcag
caaactagtgccaatcttcccaaggaaaaggtgctttcaaaaatacgcaactatttgcaa
cttcttgggcgaaggatagatcaaattgtgttggaacatgaagaggaaccctataagcaa
gatagaatgactgtgcgactgtggaaatatgtctccactttttcccatctttcaggggaa
aggcttcatcaaatatattccaaacttagacaggagcaagatgaggcaggggttggcccc
tctcacggcaatgggtcggtatctgtttcatttaccagaaatggaaatccattccgtgtc
cacatggagaggcaaagaggattaaaaaatatgagtacctatcaaatgccagaagcagtt
gataatagtgggaaatctgaggcatggaaacgaagaagaagagctgaaagtgataatcaa
ttccagggtcagccgccacctcaaaggaccgcaagtaatggactcaggattactgatcct
aactcactcgggatccttggtgctgggccatcagataaacgctttgctaatgagaaacct
tataggacacaacctggtgggtttccttcaagacagggcttctcctcaggtataaagtaa
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