Phaseolus vulgaris (common bean): 137827175
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Entry
137827175 CDS
T03093
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
137827175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvu04131
]
137827175
Membrane trafficking [BR:
pvu04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
137827175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
zf_RING_Vps8
WD40_WDHD1_1st
WD40
Beta-prop_HPS5
zf_RING_Vps8_fungal
WDR55
WD40_Prp19
zf-RING_2
Beta-prop_EML_2
Beta-prop_WDR11_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
zf-RING_11
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
137827175
NCBI-ProteinID:
XP_068489503
LinkDB
All DBs
Position
11:8454658..8467186
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AA seq
956 aa
AA seq
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MAPFPSENGVEGDDEREEEDEEEEEEEEEVEDEEEEEEPRLKYQRMGGSIPSLLASDAAS
CIAVAERMIALGTHGGTVHILDFLGNQVKEYSAHASVVNDLSFDTEGEYIGSCSDDGSVV
INSLFTDEKLKFEYHRPMKAVALDPDYARKMSRRFVAGGLAGHLYLNSKKWLGYRDQVLH
SAEGSIHAVKWRASLVAWANDAGVKVYDTANDQRVTFIEKPRGSPRPELLLPHLVWQDDT
LLVIGWGTSVKIASIRTNHQRAANGSFRQVPLSGVVQVDIVASFQTSYFISGLAPFGDAL
VVLAYIPGEEDGDKDFSSSAHSRQGNAQRPEVRIVTWNNDELSTDALPVHGFEHYRAKDY
SLAHAPFSGSSYAGGQWAAGDEPLYYIVSLKDVVIAKPRDTEDHIAWLLQHGWHEKALAV
VESGQGRSELLDEVGSRYLDHLIVERKYSEAASLCPKLLRRSAPAWERWVFHFAHLRQLP
VLVPYMPTENPRLRDTAYEVALVALATNSSFHKDLLSTVKSWPSVIYSALPVISAIEPQL
NTSSMTDSLKEALAELYVINGQYEKAFSLYADLMKPEVFDFIDKHNLHDAIRGKVVQLMM
LDCKRAVPLLIQNRDLISPPEAVKQLLNADNKCDRRYFLHLYLHSLFEVNHHAGKDFHDM
QVELYAEYDPKMLLPFLRSSQHYTLEKAYEICIKRDLLREQVFILGRMGNSKQALAVIIN
NLGDIEEAVEFVTMQHDDELWEELIKQCLHKPEMVGILLEHTVGNLDPLYIVNKVPNGLE
IPRLRDRLVKIITDYRTETSLRHGCNDILKADCVNLLIKYYKEARHGVSLGNEEDEPRVK
MSDARASQVFEKSPSLRTMEMKSKTRGGGRCCICFDPFSIQNVSVIVFFCCHGYHTNCLM
DSSYTSSKKKQTTSLEKEMYDDYNGYEDDANEDSEDEETTSRGPRMRCILCTTAAS
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggctccgtttccgtctgagaacggcgtcgaaggagacgacgagagagaagaggaagac
gaagaggaagaagaagaggaagaagaagtggaagatgaagaagaggaagaggaaccgagg
ctcaagtaccagagaatgggaggtagcataccttcgctgctagcgagtgacgccgcgtcg
tgtattgccgtcgccgaacggatgatcgctctcggcacacacggcggcaccgttcacatc
cttgattttctcgggaatcaggttaaggaatactctgcacatgcttctgttgtcaacgac
cttagttttgacacagaaggtgaatatattggaagctgttctgatgacggatcagttgtg
ataaacagccttttcactgatgagaaattaaagtttgagtaccatcggccaatgaaggca
gttgcgttggatccagattatgcaaggaaaatgtccaggagatttgttgctggtggtttg
gctggtcatttatatttaaattcaaagaaatggttgggctaccgcgatcaggttttgcac
tctgctgaaggttcaatacatgctgtgaaatggagagcaagtcttgttgcttgggcaaat
gatgcaggagtgaaggtttatgatactgccaatgaccagcgtgttacatttattgaaaaa
ccacgaggaagcccacgccccgagcttttacttcctcacctggtctggcaggatgatacc
ctcttggttattggatggggaacatctgtcaaaattgcttcaataaggacaaatcaccaa
agggcagcgaatgggtcattcaggcaagttcctctttctggtgtggtccaggtggacatt
gtggcatctttccaaaccagctacttcatctcagggcttgctccctttggtgatgctttg
gttgttcttgcatatattcctggagaagaagatggagataaggattttagtagctctgct
cattcacggcagggcaatgctcaaagaccagaagtaagaatagtaacatggaataatgat
gagctttctacagatgctctgccagtacatgggtttgagcattacagggcgaaagactat
tctcttgcacatgctcccttctcaggtagcagttatgctggtggtcagtgggctgcaggt
gatgaaccactttactatattgtatctctgaaggatgtagttattgccaagccaagggat
actgaagatcatattgcgtggcttcttcagcatgggtggcatgaaaaagcattggctgtg
gttgaatctggtcagggacgaagtgaactgcttgatgaggtgggatctaggtaccttgat
catctgattgtggaaaggaaatacagtgaagcggcatctttgtgtcccaagttgcttcgg
cgatcagctccagcttgggagagatgggttttccactttgcacatcttcgtcaactccct
gttttagttccttacatgcctacagaaaaccccagactacgtgatactgcttatgaggtt
gctcttgttgcattggctacaaattcttcttttcataaggatctcttgtccactgtaaaa
tcctggccttctgtaatttattctgcattacctgtaatttcagccatagaacctcagcta
aatacttcgtccatgactgattcacttaaggaggcattggcagagttgtatgtaatcaat
gggcaatatgagaaggccttctctttgtatgctgatcttatgaagccagaagtatttgat
tttattgataaacataacctacatgatgcaattcgtggaaaggttgttcaactaatgatg
ctagattgcaagcgtgcagttcctttgttgatccaaaatagggacttaataagtccacct
gaagctgtgaagcaacttctaaatgctgataataagtgtgatcgtagatattttttacat
ttgtatctccattcattatttgaagtaaatcatcatgctgggaaagatttccatgacatg
caggtagaactctacgcagagtatgatccaaagatgctactaccttttcttcgtagcagt
caacattacacccttgagaaggcttatgaaatttgcattaaaagggacctattgagggag
caagtcttcatcttaggaaggatgggaaactcaaaacaagccctagctgttattataaac
aatttgggggatatagaggaggctgtagagtttgtcaccatgcagcatgatgatgaactt
tgggaagaattgatcaagcaatgccttcacaaacctgaaatggtgggcatattattggag
cacacagttggaaatctcgatcccctttacattgtaaataaggttcctaacgggttggaa
atacctcggctccgggatcgactggttaagattatcactgactacaggactgaaacatca
ctcaggcatgggtgcaatgatattcttaaggcggactgtgtcaatcttttaatcaagtat
tacaaagaggcaaggcatggagtttctttaggtaatgaagaagatgagccacgggttaaa
atgagtgacgctcgtgcttctcaggtatttgagaaatccccgagtctaagaactatggag
atgaagtcaaagactaggggaggtggaagatgttgtatatgttttgatccattttctata
cagaatgtatcggtcattgttttcttttgctgtcatggttatcatacaaattgtctcatg
gattcctcttacactagtagtaaaaagaaacaaaccacgtccctagagaaagaaatgtat
gatgattacaatggttatgaggacgatgctaacgaagactctgaagatgaagaaaccacg
tcgcgtggccctcgaatgcgctgtatattgtgtactactgctgctagttga
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