Phaseolus vulgaris (common bean): 137827463
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Entry
137827463 CDS
T03093
Name
(RefSeq) rRNA biogenesis protein RRP5
KO
K14792
rRNA biogenesis protein RRP5
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvu03009
]
137827463
Ribosome biogenesis [BR:
pvu03009
]
Eukaryotic type
90S particles
Other 90S particles
137827463
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
OB_RRP5
Spt6_S1
Suf
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
UTP6_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
137827463
NCBI-ProteinID:
XP_068489716
LinkDB
All DBs
Position
7:complement(39106674..39126542)
Genome browser
AA seq
1906 aa
AA seq
DB search
MAPPKRTQMKVSGDKPKIDKASKKIFKRKEKKQNDAAATKSEKLPLQLEDEVPDFPRGGE
VFANPRNDYDEFGGENHSRKTKKNKRRKALIKSNEAVDDWGSLSGEGITGKLPRRVNKIT
LKNITPGMKLWGVVAEVNEKDLVVSLPGGLRGLVHSADAVDPIFDDAIEVGENFLTGVFN
VGQLVSCVVLRLDDDNKERGRRKIWLSLRLSLLHKNYNLDVVQEGMVLAAYVNSIEDHGY
ILHFGVSSFMGFLPKDSSTEGPGGEVKIGKLLQGLVRSIDKVRKVVYLSSDPDTISKSLT
KDLRGLSIDLLVPGMMVNARVKSILENGVMLSFLTYFTGTVDLFHLQNIYPGTNWKDKYS
ESLKVVSRVLFIDPSSRSVGLTLNPYLVLNRAPPSNVKIGDIYDDSKVVRVDKGSGLLLE
VPSIPEPTPAFVSISDIAEEEIQKLEKKFKEGNHVRVRILGLRYLEGIATGVLKASALEE
EVFTHSDVKPGMVLKAKILSVDSFGAIVQIPGGVKALCPLRHMSELEISKPGKKFKVGAE
LIFRVLGCKSKRVTVTHKKTLVKSKLGIISSYVDATDGLITHGWITKIEVNGCFVRFYNG
VHGYAPRFELGLEPGADPGTVYNVGQVVKCRVISSIPASRRIILSFMIKASRVSEDVMVT
LGSLVSGVVDRITSVNIVVRVNASSFSGGTISMEHLADHHGQAILMNKLLKPGYKFDQLL
VLDVKGSNLILSAKSSLVKHAQQIPSDINQIQPNSVVNGYICNIIESGCFVRFLGHLTGF
APRNKAVEDQKANILEAYYIGQSVRSNISNVSSETGRVTLSLKQIDCSSTDASFIQEYFL
MDEKIANIQNLDSGASDLKWLEGFNIGAVAKGKVKDVADVGLVLSFEEHNDVFGFITNYQ
LAGTVLESGSEVEALVLDVAKAERLVDLTLKPEFFNSSKESSRSRTDKKKRRREPSKELV
LHQTVKAVVEIVKENYMVVSIPENDYLVGYASISDYNTQRFPHKYQNGQSVTATVMALPS
PETSGRLLLLLNEVNETASSKRSKKSSYKVGTLVEAEITDINMFELKVKFGFGRHGRIHI
TEVHNGNDLKNPFSSYKIGQTVTARIVAKPNARNGNWKGSQWELSVRPEMVTGSSDIDDV
SGNFEFIIGQCVAGYVYKVEREWVSLTISRNVRAQIYILYSATEPSELEGFQKRFHVGQH
VSGHVLSFNSEKTVLQLVLCPFLNLTCRTNEEPQYNVVDKDLTAYVHEGDILGGRVSKIF
PGVGGLRVQVGPRTYGKVHFTEIADSWVPDPLSGYHEGQFVKCVVLEIIHTVKGSIHVEL
SLRSSSVKLSQDSVDVQSIVDANDKRVEKIEDLHLGMIVKGYIKTVTPKGCFIFLSRKID
AKILLSNLSNQYVEELEKEFPIGKLVTGRVISVEPLSSRVEVTLKTSPVLHTSKSDIIDF
SKLHVGDIISGSIKRVESFGLFIAIDNTNMVGLCHVSEIYDNQIENIEANYKPGDRVNAK
ILKVDEERHRISLGMKSSHMRDRTLLQIASKDELFEDVMKSITSTHSFLKTSNLDVEDEI
NQFPILSRAEDRGDIPPLDVSLDDFDQIDVNNANSHSEENANEEVIIKEKHKRHEKKKAK
EEREKQIRAAEERLLEEDIPRTADEFEKLIRSSPNSSFIWINYMDFMISMAAVEKARSIA
ERALMTINIREENEKLNIWKAYFNLENKYGNPREEAVMKVFQRALQYNDPKKVYLALLGM
FERTEQHNLADDLLNKMTKKFKHSCKVWLRRIQSLLNQNQDEIQPLIDRASLSLPKHKHI
KFFSQTAILEFKAGVPDRGRSLFEKILREYPKRTDLWSVYLDQEIQHKDEDIIRALFERA
VSLSLPPKKMKFLFKKYLDYEKSQGDDERIESVKRKAMEYVETTLS
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgcccaaacgaacgcagatgaaggtctcaggtgacaaaccaaaaatcgacaaa
gcctcaaagaaaattttcaaacggaaggaaaagaagcaaaacgacgccgccgcaactaag
tcggaaaaactccctttgcagctagaagacgaggttcccgatttccctcgaggtggagaa
gtttttgcaaatccaaggaatgattatgatgagtttggtggcgagaatcactcgagaaag
acgaagaagaataagagaagaaaggctttgattaaaagtaatgaggctgtagatgattgg
ggctcgctttctggtgagggtatcaccggaaagttgccaaggcgcgtgaataaaattact
ctcaagaatataactcctggaatgaagctttggggagttgttgctgaagtaaacgaaaaa
gatctcgtagttagtttacccgggggtttacgtggtttagttcactcagcagatgcagtg
gatcctatttttgatgatgcgattgaggttggggaaaatttccttactggggtatttaat
gttgggcaactggtttcttgtgttgtactgagattggatgatgacaataaagagagagga
agaaggaaaatttggctttcgttgcgtctttcattgttgcacaagaactacaacttggat
gttgttcaggaaggcatggtcctggctgcatatgttaatagcattgaagatcatggttac
attcttcattttggtgtgtcttctttcatgggattcctaccaaaagacagctctactgaa
ggcccaggtggtgaagtaaaaattgggaaacttcttcagggtttggttaggagcattgat
aaagttcgaaaagtggtttacttgagttctgaccctgatacaatatccaaaagtttgacc
aaggatctcagaggtttatcaattgatcttctagttccaggaatgatggtaaatgcccgg
gtgaagtcaatccttgagaatggtgttatgttatcatttctcacatacttcactggaact
gttgatctgtttcatttgcaaaatatttatcctggaacaaactggaaggataaatacagt
gaatctcttaaggttgtttctcgagtattatttattgatccatcaagtagatctgttggt
ttgacgctaaatccatatcttgttctgaacagagcccctccttctaatgttaaaattgga
gatatatatgatgactcaaaagttgtaagggtggataaaggatcaggactattgcttgaa
gttccatcaattccggagccaactccagcttttgtcagtatatctgatattgccgaagag
gagatccaaaaacttgagaagaagttcaaggaaggaaatcatgttcgagttcggattctt
gggttaagatatttggaaggaatcgcaacaggagttttgaaggctagtgctttggaagag
gaagtgtttactcattctgatgtcaagccaggcatggtgttgaaggctaagattctttca
gttgacagctttggtgctatagtgcaaattccaggtggtgtgaaggctctttgtcccctt
cgacatatgtctgaattggaaatttcaaagcctggaaaaaaattcaaggtgggagctgaa
ttgattttccgtgtgcttggttgcaagtcaaagagagtgacagttacacacaagaaaacc
ctcgtgaaatcgaaacttgggattattagttcatatgttgatgcaactgatggtttgata
acccatggatggataacaaagattgaagttaatggatgctttgtacggttttacaatggg
gtgcacggatatgctcctagatttgaacttggattagagccaggtgctgatccaggtact
gtgtacaatgttggacaagttgtcaaatgccgggtcataagttccattcctgcttcacgg
aggatcattcttagtttcatgataaaggcctcaagggtatctgaagatgttatggttacc
ttgggcagccttgtttcaggagttgttgacagaattacatccgttaatatagttgttcgt
gtcaatgcaagtagtttctcagggggtacaatatccatggagcacttggcagatcatcat
gggcaagctattctgatgaacaaactattgaaacctggatataaatttgatcaattgttg
gttctagatgttaagggaagcaatttgattctgtctgccaaaagctctcttgttaaacac
gctcagcagattccttcagatatcaatcagattcagcctaactctgttgtgaatggttat
atatgtaacataattgagtctggctgctttgttcgtttccttggtcatttaactggcttt
gctccaagaaataaggctgtagaagaccagaaagccaatattttggaagcctattacatt
ggtcaatcagttcgcagcaacatatccaatgttagtagtgaaactggtagagtaacactc
tctctaaagcagatagattgttcttcaactgatgcatcatttattcaggagtactttctc
atggatgaaaagattgcgaatattcaaaatttggactctggtgcatctgatttgaagtgg
cttgaaggatttaacattggtgcggttgcaaaagggaaagttaaggatgttgcggatgtt
ggacttgttctaagctttgaagagcataatgacgtttttggttttattaccaattatcag
ttggctggaactgttttggagagtgggtcagaagtggaagcattggttcttgatgttgca
aaggcagaacgccttgttgatttaactctaaaaccagagttctttaatagttctaaagaa
agttccagaagtcgtaccgacaagaagaaacgtagaagggagccatccaaggagttggta
ttgcatcagacggtgaaggcagtagtggaaattgtgaaagaaaattacatggttgtatca
attccagaaaatgattacttggtaggatatgcatctatatcggactataacactcaaagg
tttcctcataaataccaaaatgggcagagtgttactgcaactgttatggctcttccaagc
ccagaaacatcgggaaggttgcttttacttctaaatgaggtaaatgagacagctagttct
aaaagatccaagaagtctagctataaagtgggaactctggttgaggcagagattactgat
atcaatatgtttgaactgaaagttaagtttgggtttggtcgacatggcaggattcacata
acagaggtacataatggtaatgatttgaaaaatccattctctagctacaaaattggacag
acagtgactgcaaggattgttgcaaaacctaatgcaagaaatggcaattggaagggctca
cagtgggagctttctgtcagacctgaaatggttacaggttccagtgatatagatgatgta
tcaggaaattttgagtttataatcgggcaatgtgtggctggttatgtatataaagtagaa
agggaatgggtatcgttaacaatatcgcgaaatgtgagagctcagatatatattctttat
agtgctactgaacccagtgagctagagggtttccagaagcgatttcatgttgggcaacat
gtttctggtcatgtactaagtttcaactcagagaagacggtattgcagttggttctatgc
cccttcttaaatcttacttgcagaacaaatgaagagccacaatataatgtcgtggacaag
gatttaacagcatatgtacacgaaggagatattttaggtggaagggttagtaaaatattt
ccaggtgttggtggattgcgtgttcaagtaggtcctcgaacatacggaaaagtacatttt
actgaaattgcagactcatgggtgcctgatccattgtctggatatcatgaagggcagttt
gtcaaatgtgtagtgcttgaaattattcatactgtaaagggtagcattcatgttgaattg
tccttgcgatcttccagtgtgaagctttcccaagattctgtagatgttcagagcattgtg
gatgctaatgacaaacgtgtagagaagattgaggatctacaccttggtatgattgtaaag
ggttatattaaaactgtcacaccaaagggttgcttcatttttctctcacgaaagattgat
gccaaaattcttctatccaatttatctaatcaatatgttgaagaactcgagaaagaattt
cctattggaaaacttgtaactggcagggttatatctgtggagcctctttcaagtcgtgtt
gaagttacactgaagacatcaccagttctccatacatccaaatccgatattattgatttc
agtaaacttcacgttggagatattatatctggcagtattaagcgggttgagtcttttggt
ttattcattgcaattgacaacacaaacatggttggactatgccatgtatcagaaatttat
gataaccagattgagaatatcgaagcaaactataaacctggagatagagtaaatgcaaaa
atattaaaggtggatgaagaaagacacagaatttctttgggaatgaagagttcacatatg
agggatagaacattacttcaaatagcatccaaggatgaactttttgaagatgttatgaag
tctataacttctacgcatagttttcttaaaacctcaaatttagacgttgaggatgaaatt
aatcaattcccaattctttcacgagcagaagataggggagacattccaccacttgacgtt
tcccttgatgactttgatcaaattgatgtaaataatgctaatagtcacagtgaagagaat
gcaaatgaagaagtcattataaaggaaaaacataaaaggcacgaaaagaagaaagcaaaa
gaagaaagggagaagcaaataagggcagccgaggaaagattactggaggaggatatacct
agaactgccgatgagtttgaaaagcttattagaagctctcccaatagcagtttcatctgg
ataaattacatggatttcatgatttctatggctgctgttgagaaagcccgctctattgca
gaaagagctttgatgaccataaatatccgagaagagaatgaaaagcttaacatctggaag
gcatactttaatttggaaaataagtatggcaaccctagagaggaggctgtaatgaaagta
ttccaaagagcactacaatacaatgatcccaaaaaggtctatctagcactgttgggaatg
ttcgagaggaccgaacagcataatttagctgatgaccttctcaataaaatgacaaagaag
ttcaagcattcgtgcaaagtttggttgaggcgtatacaaagtcttttgaatcaaaaccag
gatgaaatccaacctctcatcgatcgagcttctttaagccttcccaaacataagcatatt
aaatttttctctcagacagctattcttgaattcaaagccggtgttccagatcgagggcga
tccttgtttgaaaaaattcttcgggagtacccaaagagaacagatttatggagtgtttat
cttgatcaagaaattcaacataaagacgaagatataattcgtgcgctgtttgaaagggct
gttagtctgagtctcccacctaaaaagatgaagttcttgttcaaaaagtatcttgattat
gagaaatcccaaggtgatgatgaacgtatagaatctgtgaagaggaaagcaatggaatat
gttgagactactctgtcttga
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integrated database retrieval system
