Phaseolus vulgaris (common bean): 137827682
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Entry
137827682 CDS
T03093
Name
(RefSeq) RING-H2 finger protein ATL65
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvu04121
]
137827682
Enzymes [BR:
pvu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137827682
Ubiquitin system [BR:
pvu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137827682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_16
zf-RING-like
zf-C3HC4_3
zf-C3HC4_IRF-2BP1_2
Motif
Other DBs
NCBI-GeneID:
137827682
NCBI-ProteinID:
XP_068490040
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All DBs
Position
11:4388066..4390430
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AA seq
395 aa
AA seq
DB search
MTPSQPPHWAPSSSPSPTPTPIFNKSFLPPPSNSPAVDFSPPLIAMVVVVAAAFLVVTYS
RLIARHLRPPLHRLLHRFRRRRFPPSSVGDLESLPYESPFDGSRVFSPYGLDETVIKTIP
FSLYTAKYDARFEESRNDCAVCLLEFEDEDYVRTLPVCSHTFHVDCIDAWLRSHANCPLC
RAGVLCADSPFTPMMAARIRPSLDDDTILHRISLDPLLDPPLPLAISAVPEITPCIDEQS
PRRNQNQSHANVNSEDCFRDFLLKRSYSFGFERSVASERMVMEAATASPWRYRRGSNSFW
SKRPSPFGSLGKPRVFSFRYYRGMKSPFFRRRGFFPLSESSVRYGGGGSSSRRSKSIASP
MFLRSSGLAAAAFSSSRLRCGDPEALLSPERFNRR
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgactccttctcagccaccccattgggccccatcttcatctccatctccaaccccaaca
ccaatattcaacaaatcattcttgccaccaccatccaactcgccggcggttgacttcagc
cctcccttgatagcaatggtcgtagtcgtcgccgccgcctttctcgtcgtaacctactcc
cgcctcatcgcgcgccacctcaggccgccacttcaccgccttctccaccgcttccggcgg
cggagattccctccgtcttccgtcggcgacctcgagtccctaccctacgagtctcccttt
gacggctcgcgcgtcttctctccctatggcttagacgaaacggtgattaaaacgataccg
ttttcgctttacaccgccaaatacgacgcgcgtttcgaagagtctcgcaacgactgcgcc
gtttgcttgctggaattcgaagacgaagactacgtgaggacgcttcccgtttgttcacac
acgttccacgtggactgcatcgatgcgtggcttcgatcgcacgctaactgccctctctgc
cgcgctggagtcctctgcgccgattcgcctttcaccccgatgatggccgcaagaatccga
ccaagcctcgacgacgacacaattctccaccgcattagcttagaccctctcctcgacccc
ccacttcctctggcaatatccgccgtgccggagataacgccctgcatcgacgagcaatct
ccgaggaggaaccagaaccagagccacgcgaacgttaactcggaggattgttttagggat
tttctgctgaagaggtcttattcgtttgggtttgaacggagtgtcgcgtcggagaggatg
gtgatggaagccgccactgcgtcgccgtggcggtaccgaagagggagtaacagtttctgg
agcaagaggccgtcgccgtttgggtctctggggaaaccgagggtgttttcatttcggtat
tatagagggatgaaatcaccgttcttccggcggaggggattcttcccgctgtcggagtcc
agcgtgaggtacggcggcggcgggagctcatcgcggcggagcaagtcgattgccagccca
atgtttctgcggtcgtcggggctggcagcggcggcgttctcgtcgagccggctgaggtgc
ggggatcccgaggcgctgctatcgccggagagatttaaccggaggtga
DBGET
integrated database retrieval system