Phaseolus vulgaris (common bean): 137828908
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Entry
137828908 CDS
T03093
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu00040
Pentose and glucuronate interconversions
pvu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
137828908
Enzymes [BR:
pvu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
137828908
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
137828908
NCBI-ProteinID:
XP_068491761
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Position
7:complement(25588920..25591604)
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AA seq
485 aa
AA seq
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MVQTTYIFLFFSVLPSFLPHGTAKLNLTLPGQHPDPEAVATEVHRRVNASMGRREMLGLS
EKEVASCLTGNPIDDCWKCDPDWANNRQRLADCGIGFGQNAKGGKGGQFYIVTDSSDEDA
VNPKPGTLRYAVIQNEPLWIVFPSNMMIKLSQELIFNSYKTIDGRGADVHIVGGGCITLQ
YISNVIIHNIHIHHCHPSGNTNVRSSPEHYGYRTESDGDGVSIFSSRDIWIDHCTLSRCK
DGLIDAVMGSTAITISNNHFSHHNDVMLLGHSDHYLPDSAMQVTIAFNHFGEDLVQRMPR
CRLGYIHVVNNDFTRWEMYAIGGSGRPTINSQGNRYTAPENAYAKQITKRLDAGEGEWSG
WNWRSEGDVMLNGAFFVASGGETGAAYQNAYSVEPKNVDRISLLTMSAGVLGVARDNNLG
MWTRGPNDGAVYFSDTGPEYTDDMSRSTVPLPPSPTCTLLSAFLAFFCLLFHTNYLNNTS
IANEL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggtccaaacgacctacattttcctcttcttctccgttctgccctcatttttacctcat
ggaacagcaaagctcaatctcactcttccagggcaacatccagacccggaagctgttgcc
acagaagttcataggagggtgaatgcttcaatgggaagaagggaaatgctggggttgtca
gagaaagaggtggcgtcatgtctcacaggtaaccccattgatgattgttggaagtgtgac
ccagattgggccaacaacaggcagaggctagctgattgtggaattgggtttgggcagaac
gcaaagggtggaaaaggtgggcaattttacatagtcactgattcatctgatgaggacgct
gtgaacccaaaaccaggaacacttaggtatgcagtgatacagaatgagccactgtggatc
gtgttccccagtaacatgatgattaagctctctcaggaactcattttcaatagctacaaa
accattgatgggcgtggcgctgatgtgcacattgtgggtggaggctgcatcactcttcag
tatattagcaatgtcattatacacaacattcacatccaccattgccatccctctggtaac
actaacgtgcggtcgagtccagagcactacggctaccgaacggaatcagacggcgacgga
gtctcgatcttctcgtcgcgcgacatctggatcgatcactgcacgctatcacggtgcaag
gacggtctgatagacgcggtgatgggttcgaccgcaataacgatctcgaacaaccacttt
tcgcaccacaacgacgtgatgctcttaggccacagcgaccactacctgccagactcggcg
atgcaggtgacgatcgcgttcaaccacttcggagaggatctggtgcagcgcatgccgcgt
tgcagactagggtacatccacgtcgtcaacaacgacttcacgcgatgggagatgtacgcg
atcgggggaagtgggaggcctacgattaacagccagggaaaccgctacactgcgccggag
aatgcgtacgcgaagcagattaccaagaggctggacgccggagaaggagagtggagcggc
tggaattggaggtcggaaggggacgtgatgctgaacggcgcgtttttcgtggcctcagga
ggtgagaccggagctgcctaccaaaatgcgtacagcgttgagcctaagaacgtggatcgc
atctcgctcctcaccatgtctgctggtgttctcggcgttgcaagggacaataatctggga
atgtggacgagaggacccaacgatggtgcagtgtatttttcagatacaggtccagaatac
acagatgacatgtctcggagtacagtgccgctgccaccttcacctacttgcactcttcta
tctgcgtttctcgctttcttctgcctcttatttcatacaaattaccttaacaacacttct
atagcaaatgagttgtaa
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