Phaseolus vulgaris (common bean): 137829562
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Entry
137829562 CDS
T03093
Name
(RefSeq) serine/arginine-rich splicing factor RS40 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137829562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvu03041
]
137829562
Spliceosome [BR:
pvu03041
]
Common components
Common spliceosomal components
SR proteins
137829562
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RNA_bind
RRM_5
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
137829562
NCBI-ProteinID:
XP_068492491
LinkDB
All DBs
Position
7:6064774..6068719
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AA seq
373 aa
AA seq
DB search
MQGKMRPIFCGNFEYDARQSELERLFRRYGKVDRVDMKSGFAFIYMEDERDAEAAIRALD
RVEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANGRPSKTLFVINFDTYHTRTRDLERHF
EPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYS
PERGRDRQRDRSRDGRRSPSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRR
ERASPAYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDHGISPSHSLEERGRKSPQN
GRGSSHSPRDTGKTSPENGHGSGSPEEKGNPSPYNGYGRSPNTVPDPRDSPNYGGPESPM
HERYRSQSPPADE
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgcaagggaagatgaggcctattttctgtggaaacttcgaatatgatgcccggcagtca
gagttggagcgtctttttagacgatatgggaaggttgacagggtggatatgaagtctgga
tttgcttttatctatatggaagatgaaagagatgctgaagctgctattcgtgctcttgat
cgagtagaatttggtcggaagggacgcagactccgtgtggaatggacaaagcatgaacgt
ggtgtgagaaggccttctagttcaagaagatcttcagctaatgggaggccatcaaagacc
ttgttcgtaataaattttgatacataccataccagaacaagggacttggagaggcacttt
gaaccttatggcaagatagtcagtgttaggatcagaaggaattttgcttttgttcagtat
gagtcagaggatgatgctagcagagcactggaagctacaaatatgagcaagttactggat
cgagttatttcagttgaatttgctgttaaagatgatgatgataggagaaatggatatagc
cctgagagaggccgtgatcgtcaacgtgatagaagccgtgatggaagacgatcccctagt
ccttataggagagaaagaggtagtcctgattatggccgtgggccaagtccatatcagaga
gagaggggcagccctgactatggccgtgaccgaagccggagcagaagccctcctaggaga
gagcgagctagccctgcatatgggcgcagaagccctagtccatatagaagagaaagggag
ggttctgatcctgttcgggactccagccgcagtccttatcacaaagaacgtgggagaact
gaccatggcatttctccttctcacagtctcgaagaaagagggaggaaaagccctcaaaat
ggtcgtggttctagccatagtcctcgtgatactgggaagactagccctgaaaatggacat
ggctctgggagtcctgaagaaaaagggaatcccagcccttacaatggttatggaaggagc
ccaaatactgtgcctgatcctagggacagtcccaattacggtggccctgaaagtcccatg
catgaaagatatcgcagccagtctccccctgcagacgaatga
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