KEGG   Phaseolus vulgaris (common bean): 137829819
Entry
137829819         CDS       T03093                                 
Name
(RefSeq) LOW QUALITY PROTEIN: cyclin-H1-1
  KO
K06634  cyclin H
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03022  Basal transcription factors
pvu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    137829819
  09124 Replication and repair
   03420 Nucleotide excision repair
    137829819
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvu03021]
    137829819
   03400 DNA repair and recombination proteins [BR:pvu03400]
    137829819
Transcription machinery [BR:pvu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     137829819
DNA repair and recombination proteins [BR:pvu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     137829819
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB Ku_C
Other DBs
NCBI-GeneID: 137829819
NCBI-ProteinID: XP_068492861
LinkDB
Position
7:complement(29961518..29967307)
AA seq 412 aa
MLCFCWLKNKPNTKKHNHPHLRPFPQIFPTTTTTTGSSSRTLLSDDLSLENLGLNLCLSF
FICESNIKAVQLGLSFSMADFMTSTHRVKWIFSPQQLVEKYKAANQRAKQILEKYGATLM
EVDVDGSXSYPEPQMTAKDTGEKHSRTKPLSIEEEQCIRVFYENKLQEVCNNFRFPHKIQ
ATALIYFKRFYLQWSVMEHQPKHIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNE
MIVYQSLEFDLIVYAPYRSVEGFINDMEEFCNAGDDQLQMLKTLQETARLEVDKMMLTDA
PLLFPPGQLALAALGNSNALHKVVDFDSYLGSILSRQNSMHTMAELDESLHAIDSCVKKY
KIPSEKELKHINRKLKSCWGHSSHDEGKKREKKSKHKSKRSSSEAQNMPSLV
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgctgtgtttttgctggttaaagaataagccaaatacaaaaaaacataatcatcctcat
ttgcgtcccttcccccaaatttttcccaccaccaccaccaccactggttcctcatcacgg
acattgctatctgacgacctcagcttggagaacctcggccttaatctgtgcttgtccttt
tttatttgtgaatcaaacataaaagcagttcagttagggctctcattctccatggctgat
tttatgacctctactcatcgagtgaagtggattttctcccctcaacagctggttgagaaa
tataaagcagctaatcagagagccaaacaaattctagagaagtatggtgcaactctaatg
gaagtagatgttgatggttcantttcatatcctgaaccccagatgactgcaaaagacact
ggtgagaagcattctcggacaaaacctcttagtattgaagaagaacaatgcatacgggta
ttttatgaaaacaagctacaagaagtatgtaacaattttcgcttccctcataaaatccag
gcaacagccctcatctattttaaaagattctatctacaatggtcggtgatggaacatcaa
ccaaaacatattatgttgacctgcatatatgctgcttgtaagatagaagaaaatcatgtg
tcagctgaggagcttggtaaggggatctcacaggatcatcaaatgattctcaataatgag
atgatagtttatcagagtttggaatttgatctaattgtttacgcaccatatcgctcagtt
gaaggttttataaatgatatggaggaattttgcaatgctggtgatgatcagcttcaaatg
ctcaagactttgcaagagacagcaaggttggaagttgataaaatgatgcttacagatgca
ccacttttatttcctcctgggcagttggccttggctgctctgggtaactcaaatgcactg
cacaaagtcgttgacttcgatagttatcttgggagcattctttcccgtcagaattccatg
catacaatggccgagcttgatgaatcactgcatgcaattgattcttgtgttaaaaaatac
aaaattccgtctgagaaggaattgaagcatatcaaccgaaaactgaagtcttgttggggt
catagctctcacgacgagggcaagaagcgggaaaagaaatcaaagcacaagtccaaacgg
agctcaagtgaagcacaaaatatgccatctcttgtctag

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