Phaseolus vulgaris (common bean): 137830018
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Entry
137830018 CDS
T03093
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvu03041
]
137830018
Spliceosome [BR:
pvu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
137830018
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_ACIN1
RL
RRM_PARP14_3
RBD_AKAP-17A
DUF1797
TGF_beta
Motif
Other DBs
NCBI-GeneID:
137830018
NCBI-ProteinID:
XP_068493194
LinkDB
All DBs
Position
7:8188587..8197550
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AA seq
443 aa
AA seq
DB search
MTEPSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAVNALQF
YANIQPSIRGRNVYVQFSSHQELTTMDQSQGRGDEPNRILLVTVHHMLYPITVDVLFQVF
SPHGTVEKIVTFQKSAGFQALIQFQSRQSAVNARSTLQGRNIYDGCCQLDIQFSNLDELQ
VNYNNDRSRDFTNPNLPTEQKGRPSQPGYGDAGNMYAAQGSGGRAVGFPQMANAAAIAAA
FGGGLPPGITGTNERCTVLVSNLNSDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALIQM
GDGFQAELAVHFLKGAVLFEKQLEVNFSRHPNITQGAETHEYISSNLNRFNRNAAKNYRY
CCSPTKIIHLSTLPQDITEEEIVSLVEEHGTIVNSKVFEMNGKKQALVQFENEEQATEAL
VCKHASTLSGSVIRISFSQLQNI
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaccttccaaggtcgttcacgttcgaaacgtgggacacgaaatatccgaaaac
gatttactccagctgtttcagccttttggagtcataactaaacttgttatgttgcgtgca
aaaaatcaggctcttctccaaatgcaagatgttccttctgcagttaatgctttacaattt
tatgcaaatatccagccaagtataagggggaggaatgtttatgttcagttttcctcacac
caagaactgacaacaatggatcaaagtcaaggacgtggagacgagccaaaccgaattctc
ttagtcacagttcatcacatgctgtatcctataacagtggatgtgctgtttcaagtattt
tcaccccatggaactgtggaaaagattgtaacatttcagaagtcagctggctttcaagct
ctcatccagtttcaatcacgtcagagtgctgttaatgcaagaagtacacttcagggacgc
aatatttatgatggttgctgtcaactggacattcagttctcaaaccttgatgaattacaa
gtgaactacaataatgaccggtcaagagacttcacaaacccaaatctaccaacagagcag
aaaggaagaccttcacaacctggatatggtgatgcaggaaatatgtatgctgctcaaggt
tctggagggagggcagttggatttccacagatggcaaatgctgcagccattgcagctgcc
ttcgggggaggtttgcctcctggaataactgggacaaatgaaaggtgtacagtgcttgtc
tcaaatcttaattctgatagaattgatgaggataaactattcaacttgttctctatttat
gggaatattgtgagaattaaacttctcagaaataaaccagatcatgcacttatccagatg
ggtgatggttttcaagctgaattggctgtacactttctgaagggagccgtgttgtttgag
aaacagttagaggtcaacttctccaggcatccaaacataacccaaggtgctgagacacat
gaatatatcagttcaaatctcaaccgtttcaaccgtaacgcagccaaaaactaccggtat
tgctgctctccaacgaagattatccatttgtccacactcccgcaagacatcactgaggag
gagattgtgagccttgtagaggagcatggaaccattgtcaacagcaaagtctttgagatg
aatgggaaaaaacaggctctagttcagtttgagaatgaggagcaggctactgaagccctt
gtgtgcaagcatgccagcacactttctggctcagtaatccgtatctccttttcgcagtta
cagaatatatga
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