Phaseolus vulgaris (common bean): 137830477
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Entry
137830477 CDS
T03093
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvu04131
]
137830477
04121 Ubiquitin system [BR:
pvu04121
]
137830477
Enzymes [BR:
pvu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137830477
Membrane trafficking [BR:
pvu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
137830477
Ubiquitin system [BR:
pvu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137830477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_11
zf-rbx1
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
CxC4
zf-Nse
Stm1_N
DUF2015
Rad50_zn_hook
DZR
Motif
Other DBs
NCBI-GeneID:
137830477
NCBI-ProteinID:
XP_068493944
LinkDB
All DBs
Position
7:complement(36725466..36727898)
Genome browser
AA seq
308 aa
AA seq
DB search
MSNSRNTHWCYSCRRPVRLGRRDAVCPSCNEGFVHELNDMVHVNPFDLFGMDNNEERDQR
VGLMETFSAFMRHQMADRGRSRDIRAQTDSNPEHSAGFAPLLIFGGQIPFRLSGHGGFEA
LFNGAPGIGMTRGNTGDYFVGPGLEELFEQLSASNRQGPAPASRSSIDAMPTIKITQRHL
RSDSHCPVCKDKFELGSEARQMPCHHLYHSDCIVPWLVQHNSCPVCRQELPPQGLSSNRG
TNGRSRSGSGRVSSSGRESQGRRNPFSFLWPFRSSHSSSNDEATGSSTPAPSIPENSHHA
GYSGWPFE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatagtaggaacacacattggtgttatagttgcaggaggccggttcggctgggg
cggcgagatgcggtttgtcctagctgtaatgagggatttgttcatgaacttaatgatatg
gtgcatgttaatccttttgacttgtttggaatggacaacaacgaagaaagagaccaaagg
gtcggactcatggaaaccttctctgccttcatgaggcatcaaatggcagacagaggcaga
agtcgtgacatcagggcacaaacagattcaaatcctgaacacagtgcagggtttgctcct
ctgttgatctttggtggccaaatacctttcagattgtccggccacggcggcttcgaggct
ctcttcaacggggctcccggaatcggcatgacacgaggcaacacaggcgactattttgtt
ggtcctggacttgaagaactgtttgaacagctttcagctagtaacaggcaaggtccagca
ccagcatcaagatcctcaatcgatgccatgcctaccatcaagatcacgcagaggcatctt
cgatcagattctcattgtccagtttgcaaggataaatttgagctggggtctgaagcaaga
caaatgccatgccaccatttgtatcactcagattgcattgttccatggttggtccagcat
aactcctgccccgtttgtcgccaagaactgccaccacaaggattgagcagtaatcgaggc
acaaatggtagaagtagaagtggaagtggaagggtaagcagtagtggtagggagagccag
ggaaggagaaatccattttcctttttgtggccttttcgttcttctcattccagcagtaat
gatgaagcaaccggaagcagcacaccagcaccaagtatcccagagaatagccatcatgca
gggtactctgggtggccatttgaatga
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integrated database retrieval system
