Phaseolus vulgaris (common bean): 137830531
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Entry
137830531 CDS
T03093
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic isoform X1
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
137830531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvu03400
]
137830531
Enzymes [BR:
pvu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
137830531
DNA repair and recombination proteins [BR:
pvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
137830531
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SAP
Exo_endo_phos_2
FAR3
Motif
Other DBs
NCBI-GeneID:
137830531
NCBI-ProteinID:
XP_068494038
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Position
7:37200905..37206875
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AA seq
546 aa
AA seq
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MKQLLQFVSTTSINIISVAVFRKHLNATVLVCSTVKAMGSKRSFSSSSKPISPFVEGKKD
MELKGLEANPGSKKHAVVEENDVNIYSVEIQRLKNDLTIVDTMTVQELRKTLKRFRVPAK
GRKDDLLSALKSFMDSSMFEQDSHIREEQELLTSAENTSIEVKAKRVLDEDHVDDFNETS
EISELKQGKKRLKQSESGRKTVKVAIKKKVSSKSDGDTADFKPSRAKRKVSTDIVSIVAE
SDEISTATIQTEPWTVLAHKKPQKGWIAYNPRTMRPPPLDKDTKFVKLLSWNVNGLRALL
KFEGFSALQLAQREDFDILCLQETKLQEKDIEDIKQRLIDGYDNSFWTCSVSKLGYSGTA
IISRIKPLSVRYGLGISDHDSEGRLVTAEFDTFYLICGYIPNSGDGLKRLSYRVTEWDPS
LSNYIKELEKSKPVILTGDLNCAHEEIDIYNPAGNKRSAGFTDEERKSFATNFLSRGFVD
TFRRQHPGVIGYTYWGYRHGGRKNNRGWRLDYFLVSESIADKVHDSYILPDVNGSDHCPI
GLIVKF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaactcctgcaatttgtctctaccacctctatcaatatcatcagcgttgcagtg
tttcggaagcatttgaatgctactgtattggtttgttcaactgtgaaagcaatggggtcc
aaaagatccttttcaagttcatctaagccaatttcaccatttgttgagggcaagaaggat
atggagcttaaggggttggaagcaaaccctggttccaagaagcatgctgttgttgaggag
aatgatgttaatatctattccgttgagattcagagattaaaaaatgacctgacaatagta
gacacaatgactgttcaggaactccggaaaacattgaagagatttagggtccctgctaaa
ggtcgtaaagatgatcttttgtctgccttgaagagtttcatggacagtagcatgttcgaa
caagattctcatataagagaagagcaagagctattaacttctgctgaaaatacttctata
gaagtgaaggctaaaagggtattggatgaagaccatgttgatgatttcaatgaaacatca
gagatatctgaacttaaacagggtaagaaaaggttaaaacaatctgaatctgggagaaaa
actgtcaaagtggcgatcaagaagaaagtttcttcaaaatcagatggtgacacagcagat
tttaagccttccagggcaaagagaaaagtatctacagatattgttagcattgttgcagag
tcagatgaaatcagtacagctaccattcaaactgaaccatggacagttcttgcccacaag
aaacctcaaaaaggttggattgcatataatcctagaacaatgagaccaccaccgcttgat
aaagatacaaaatttgtcaagcttttgtcttggaatgtcaatggattgagagcattgcta
aaatttgaaggattctcggcccttcaacttgcccaaagggaagactttgatatattgtgt
ttgcaagagactaagctgcaggagaaggatattgaggatattaaacagcgtctaatagat
ggctatgataacagcttttggacatgtagtgtttctaagcttggttattctggaacagca
attatctcaaggataaagcccctttcagttagatatggcctaggtatatctgatcatgat
agtgagggtagacttgtgacagctgagtttgatacattttatttgatatgtggatacatc
cctaattctggagatggcttgaaaagactgtcttacagggtgactgaatgggatccatct
ctcagcaattatataaaagaattggaaaagtcaaaaccagtaattttaactggtgatcta
aattgtgctcatgaagagatagacatatacaaccctgctggtaacaagagaagtgctggg
tttacagatgaagagaggaaatcatttgcaacaaacttcttatctaggggatttgtagat
acctttagaaggcagcaccctggtgttattggatatacttattggggttatcggcatggt
gggcgcaagaataacagagggtggcgtcttgattatttcctcgtctcagaatccattgct
gacaaagttcacgattcatacattcttcctgatgtgaatggtagtgatcattgccccatt
ggtcttattgtcaagttttag
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