Phaseolus vulgaris (common bean): 137830533
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Entry
137830533 CDS
T03093
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137830533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvu03041
]
137830533
Spliceosome [BR:
pvu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
137830533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
PRP4
ANAPC4_WD40
Beta-prop_EIPR1
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
WD_LRWD1
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_Nup120_160
WD40_like
Motif
Other DBs
NCBI-GeneID:
137830533
NCBI-ProteinID:
XP_068494048
LinkDB
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Position
7:complement(37215934..37221446)
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AA seq
570 aa
AA seq
DB search
MEVEKENTASTITAEPSLPASDGQDTISDNASLPHSIQPVIPPVIAPSVVPPLAPIPAIP
PPRPLAPLPVRPPVIRPPVPQNGKVGSSDSDSDNDDSNGRINQGTGEYEVSEESRLVRDR
QEKAMQELMMKRRAAALAVPTNDMAVRARLRHLGEPITLFGEREMERRDRLRMIMAKLDA
EGQLEKLMKAHEDEEAAASAPKDEAEEELQYPFYTEGSKALLDARIYITKYSLARAALRI
QRAQRRRDDPDEDMDAEIDWALTQAGNLNLEFSEIGDDRPLSGCSFSRDGKCLATCSLTG
ASKLWSMPNIEKRSTLKGHTERATDVAFSPVHDHLATASADRTAKYWNDQGSLLKTFGGH
LDRLARIAFHPSGKYLGTASFDKTWRLWDIETGEELLLQEGHSRSVYGLAFHRDGSLAAS
CGLDSLARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKKKSF
YTIPAHSNLISQVKFEPQEGYFLVTASYDMTAKVWSGRDFKPVKTLSGHEAKVTSVDVLG
DGGHIVTVSHDRTIKLWSSNTTNEQAMDVD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggagaaggaaaacactgcatcgactattactgcagaaccatctttacctgcc
tctgatggtcaagatactatttcggataatgcatctctaccccattcaatacaacctgtt
attccaccggttattgctccttctgttgttcctcctttagctccaattcctgcaattcct
ccccctcgcccgctggcaccacttccagttcggccaccagtcattaggccacccgtgcca
caaaatggcaaggttggatctagtgactctgactcggacaatgatgactcaaatggaaga
attaaccaggggactggggagtatgaggtatctgaggagagtagactggtgagagatcgg
caggaaaaggcaatgcaggaactcatgatgaagaggcgtgcagctgcacttgctgttcct
acgaatgacatggctgtgcgagctcggcttcggcatcttggtgagccaataactctgttt
ggtgagagagagatggagaggcgggacaggttgcggatgattatggcgaagctagatgca
gaaggtcagttggagaagctgatgaaagctcacgaggatgaagaagctgcggcttctgct
ccaaaagacgaggctgaggaagaactgcagtatcctttttacactgaagggtcaaaggct
ctcctggatgccagaatttatattactaaatattctttagcgagggcagcattacggatt
caacgggcacaaagaagaagggatgatccagatgaagatatggatgcagagattgattgg
gcattaacgcaggctgggaatttgaatctcgaattcagtgagattggagatgatcgacca
ctttctggttgctccttctcaagggatggaaaatgtcttgctacctgttctctgactgga
gcttccaagttgtggagcatgcccaacatagaaaagcgttccaccttgaaggggcacaca
gaacgtgctactgatgttgctttttctcctgttcatgatcatttagcaacagcctctgct
gatcgaacagcaaagtattggaatgatcaaggatcacttttgaaaacattcgggggtcat
ctagaccgtcttgcacgtattgccttccatccatcagggaagtacctgggcactgctagt
tttgacaagacatggagattatgggacatagagacaggggaggagttgcttcttcaagaa
gggcatagtagaagtgtgtatggtttggctttccaccgtgatggatcattagctgcatct
tgtggactagattctctggctcgtgtttgggacctccgaactggaagaagtattcttgca
ctggaaggtcatgtcaagccggttcttggcatcagtttttcacctaatggatatcatcta
gccactggtggtgaagacaacacatgtcggatttgggatttgaggaagaagaaatccttc
tatactattcctgctcactccaatttaatatcacaagttaaatttgagccacaagaaggt
tactttttggtaactgcctcatatgacatgactgctaaggtttggtcaggccgtgacttt
aagcctgtgaagacactatctgggcatgaagcaaaagttacctctgtggatgttcttgga
gatggcggccacattgttaccgtctcccatgatcgcaccataaaactgtggtccagcaat
acgactaacgaacaagcaatggatgttgattaa
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integrated database retrieval system
