Phaseolus vulgaris (common bean): 137830637
Help
Entry
137830637 CDS
T03093
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137830637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvu03036
]
137830637
Chromosome and associated proteins [BR:
pvu03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
137830637
SWR1 complex
137830637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
DBINO
Motif
Other DBs
NCBI-GeneID:
137830637
NCBI-ProteinID:
XP_068494191
LinkDB
All DBs
Position
7:38068774..38086799
Genome browser
AA seq
2042 aa
AA seq
DB search
MASKGPRSKIDHESRAKRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQA
KKVALRASKGMIDQATRGEKKMKEEEHRLRKVALNISKDVKKFWTKIEKLVLYKHQMELD
EKKKKALDKQLEFLLGQTERYSTMLAENLVDTHKSGENNSAEHHMSIQHKDVHGDVINEP
KEADVVEYQSDAADNDDEYDVQSDDESEDDERTIEQDEAFITKEERQEELEALHNEMDLP
IEELLKRYAGEKGESVMKESSPEHSEDVEKIVRTTGDGKKGLASENGDDHLSVSKIDPNN
SSMVSGRRCDESNGDVATPTNNLSQCEDGQSENLKGVPSETANEDFAYDFTDEEEDGDFL
LGTEEKDDETTLSEEEKLERVDAIDPNDEIALLQKESDMPVEELLARYKRDLSDNKDGGY
ESDYASALSEDHSDSPVHEDAGQKDSSIPMDEDIKSGEHLATIQSQADEHWESPHENLDQ
RESEHIIADAAAAARSAQPTGNTFSTTNVRTKFPFLLKYSLREYQHIGLDWLVTMYEKRL
NGILADEMGLGKTIMTISLLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILT
YFGSAKERKLKRQGWLKPNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQ
RWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPISGMVEG
EEKINKEVVDRLHNVLRPFLLRRLKRDVEKQLPMKHEHVIYCRLSKRQRNLYEDFIASSE
TQATLASANFFGMISIIMQLRKVCNHPDLFEGRPIVSSFDICGIDIQLSSSVCTMLLPSP
FSVVDLRGLGLLFTDLDYSMAAWESDEVQAIETPATSIMERTDIDELEVIRPLKYQNKLQ
GTNIFEDIQKKIWEERLNQAKERAAAIAWWNSLRCKKRPMYSTTLRDLVTLRHPVYDIHQ
VKANPASYMYSTKLADIVLSPIERFQKITDVVESFMFAIPAARAPSPVCWCSTSETNVFL
QPSYKQQCSEVLLPLLSPIRLAIVRRQVYFPDRRLIQFDCGKLQELANLLRKLKSEGHRA
LIFTQMTKMLDILEAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPKYFLFILSTRSGG
VGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISDSTIEENILKKANQ
KRALDNLVIQSGAYNTEFFKKLDPMEIFSGHRTLSIKNMPKEKNQNNGEVSVTNADVEAA
LKCVEDEADYMALKKVELEEAVDNQEFTEEAIGRLEEDEYVNEDDETAELGDSVSNLNKE
NALLLNGSDHKEDRPPNSVAVKEDDADVLADVKQIAAAAAAAGQAISAFENELRPIDRYA
IRFLELWDPIIDKTALESEVRIEDTEWELDRIEKYKEEMEAEIDEDEEPLVYESWDADFA
TMAYRQQVEALAQHQLMEELEYEARLKEAEEEACDSKKTTPGDLKPKPKKKPKKAKFKSL
KKGSLTSGLKPVKEESQAEPMNIDDEDVTALDFVSPNSTMQKKRKSKVRTDGEEKRLKKS
KKFKRDHHDIYASDLESNALVVQYEHSESKTCDSLVDLEQKTAGRGKMGGKISITPMPVK
RIWTIKPEKMRKGNHWSKDCIPSADFWLAQEDAILCAVVHEYGPNWSLVSDILNSMTAGG
SYRGRYRHPVHCCERFRELFQKNVLLMDNANNEKIITPGSGKALLKVTEDNIRMLLDVAS
EQVNRELLLQKHFFALLSSAWKVASHVDRRQNPSPTCNGLYFDQSHFTSICQPSQNSLKK
SSERMPFANLAQSKKLVAAALDDTTSGQVNDRVILSNQGDGMPMSADQLDITLEFPKEES
DVLALFPSVINLSIHGTEPAASLSKQTGEDDFKVGLFIAENRFREATRICEEDISGWASS
AFPTSDARSRPGSRIQSSGKQKSSISDSAKPSRSKSKRASIDPSEMPHHQADSIFQSVPS
LKDLRFDLASFTTDEVGLNAVDRCFPFDLNGESSWEMEGVGMIPHDYVTGLISDLDDLYF
IS
NT seq
6129 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaaaggtcccaggtctaagattgatcacgagagcagagccaaaaggcaaaag
gctcttgaagctcctagggagcctcggcgacccaaaactcactgggaccatgtcttagaa
gaaatggtgtggttatcaaaggattttgaatcagagaggaaatggaaattagctcaggca
aagaaagtagctctcagagccagcaaaggcatgatagatcaggctacaagaggtgaaaag
aagatgaaggaagaagaacatcggctaagaaaggttgcactaaatatttctaaggatgtt
aagaaattctggacaaaaatagaaaagctggttctttacaaacatcaaatggaactcgat
gagaagaagaaaaaggctcttgacaaacagcttgagtttttattagggcaaaccgagagg
tactcaacaatgctggcagaaaatcttgtggatactcataaatcaggagagaataattct
gcagagcatcacatgagtattcaacacaaggatgtacatggagatgttattaatgaacct
aaggaagctgatgttgtggagtatcaatcagatgccgctgacaatgatgatgaatatgat
gtacaatctgatgatgaatcggaggacgatgagcgaacaattgagcaagatgaggctttt
attactaaagaagagagacaagaggaattggaagctttgcataatgaaatggatcttcca
attgaggagttactcaaacgttatgcaggggagaaaggtgaatctgtgatgaaagaaagt
agtccagagcatagtgaagatgttgagaaaatagttagaacaactggtgatggtaagaaa
ggattagcatcagaaaatggtgatgatcatttatctgttagcaaaattgatccaaacaac
tccagcatggtctctggtcgacgttgtgatgaaagtaatggtgatgttgctacaccgaca
aacaatctatctcaatgtgaggatggtcaatctgaaaatctaaaaggggttcccagtgag
acagccaatgaagattttgcatatgattttactgatgaagaggaagatggtgactttttg
cttggcacagaagaaaaggatgatgaaacaaccttatcggaggaggaaaaactggaaaga
gttgatgcaatagatcccaatgatgagattgcattattacaaaaagagagtgacatgcct
gttgaggaattgcttgcaaggtataaaagggacctgagtgacaacaaagatgggggatat
gaatctgactatgcttctgctttatccgaagaccattcagattctcctgttcatgaagat
gctgggcaaaaggattcttccattcctatggatgaagatatcaagtctggtgagcacctg
gctaccatacagtcccaggcagatgaacattgggaatcacctcatgaaaatttggatcag
agagaaagcgagcatataattgctgatgcagctgctgctgcaagatcagcacaacctact
ggaaacactttctccacaactaatgtgcgtacaaagttcccttttctactcaagtactct
cttcgcgagtatcaacatattggattggattggcttgtcacgatgtatgaaaaaagactg
aatggaattttggcggatgaaatgggtctaggtaaaacaattatgactatatctttgctt
gcacatcttgcttgtgaaaaagggatttggggtccacatttaattgtggtaccaactagt
gtaatgcttaactgggagaccgaatttctgaaatggtgtcctgcctttaaaattttgact
tattttggaagtgcgaaggagcgaaaacttaaaaggcaaggatggttaaaaccaaactca
tttcatgtatgcataacaacttatagattagttattcaggactccaaagttttcaagcgc
aaaaagtggaaatacttgatcttagatgaagctcatctcattaaaaactggaaatcacaa
aggtggcagacactcttgaatttcaattcaaaacggaggattctcttgactggtacgcca
ctacaaaatgatctcatggaactgtggtctctcatgcatttcttaatgccccatgttttc
cagtcgcatcaagagtttaaggattggtttagtaatcctatatcagggatggtagaggga
gaagaaaaaattaataaggaggttgttgaccgcctgcacaatgtccttcgtcccttttta
ctccgtcgactaaagagagatgtggaaaagcaacttccaatgaagcatgaacatgtcata
tattgtagattatcaaagaggcagcggaatttgtatgaggatttcattgctagctcagag
actcaagcaactcttgcaagtgccaatttttttgggatgattagtattatcatgcaactt
cgtaaagtttgcaatcatcctgacctatttgagggtcgtccgattgtcagttcttttgat
atttgtggtattgatattcaattaagttcttctgtttgcactatgcttttgcctagcccc
ttttcagtggtggaccttagaggattgggtcttttattcactgatcttgactatagcatg
gctgcttgggaaagtgatgaagtacaagctattgagacccctgcaacctcaatcatggaa
cgtactgatatagatgagctagaagtaattaggccactgaaatatcaaaacaagttgcaa
ggaacaaacatttttgaagacatccaaaagaaaatctgggaagagaggctaaaccaagca
aaggaacgtgcagcagctattgcatggtggaactccttgagatgtaaaaaaagacctatg
tattcaacaactctgagggatcttgttaccttaagacatcctgtatatgatattcatcag
gtgaaagcaaaccctgcttcgtacatgtactcaacaaagctagctgacattgttctctcc
cccattgaacgatttcaaaagataactgacgtggttgaaagcttcatgtttgcaattcca
gctgcacgggcaccctctcctgtttgttggtgcagtacaagtgagacaaatgtgtttctg
cagccatcttacaagcagcaatgctctgaagttttgttaccgctactgtcaccaatccga
cttgcaattgttcgccgacaagtgtatttccctgataggcgtcttatacaatttgactgt
gggaaactgcaggaactggcaaatttgttgagaaaattaaaatctgaaggtcaccgagct
ttgatattcacccagatgacaaagatgcttgacatattagaggcattcattaatttgtat
ggctatacatacatgcgcttagatggatcaacccaaccggaggagagacagaccttaatg
cagcgctttaacacaaaccccaaatattttcttttcatcttgtcaacccgtagtgggggt
gttggtatcaatctagttggagctgacacagttattttttatgatagtgactggaatcct
gctatggatcaacaggcacaagatcgatgccacagaattggtcagacacgggaagttcat
atttatagattgattagtgacagcaccattgaggagaatattttgaagaaagcaaatcag
aagcgtgcacttgataatttagttatacaaagtggggcttataatactgagttcttcaag
aagctcgatcctatggaaatattttcaggtcatagaacactttcaataaaaaatatgccg
aaggagaaaaaccagaacaatggggaagtttctgtaacgaatgcagatgtagaggctgca
ttgaaatgtgttgaagatgaggcagattacatggctttgaagaaagttgaactggaagaa
gctgtggacaaccaggagtttaccgaagaagccattgggagacttgaagaggatgaatat
gtaaatgaagatgatgaaactgcagaattaggtgattctgtttcgaacttaaataaagag
aatgcattactgttaaatggaagtgatcataaggaagatagaccaccaaactctgttgct
gtcaaagaagatgatgctgatgttctggctgatgtcaaacagatagctgcagctgctgct
gcagctggacaagctatctcagcatttgaaaatgagctacgccctattgatcgatatgcc
attcgctttctggaactgtgggatccaattatagataaaacagccttggaatctgaagtc
agaattgaggacacagaatgggagttggatcgtatcgaaaagtacaaggaagagatggag
gctgaaatcgatgaagatgaggaacctcttgtttatgaaagctgggatgctgattttgca
acaatggcctaccggcagcaagtagaggccttggctcaacatcagttgatggaggaactc
gaatatgaagctagactgaaagaagccgaggaagaagcttgtgattctaaaaagacaaca
ccaggggatttgaagcccaaacctaaaaagaaacctaagaaggcaaagttcaaatctcta
aagaaaggatctttaacatctggcttgaaacctgtgaaagaagagtcacaagcagagcca
atgaacatagatgatgaggatgtcactgctctggattttgtgtctccaaattcaaccatg
cagaaaaaacgtaagtctaaagtaagaactgacggtgaagaaaagagacttaagaagtcc
aaaaagttcaagagggatcatcatgacatttatgcgtccgatttagaatccaacgcttta
gttgtccaatatgaacattcagaatcaaagacttgtgatagtctggttgatttggaacag
aaaacagcaggcaggggtaagatgggaggaaaaatatccatcactccgatgcctgtaaaa
cggatctggacgataaagccagaaaaaatgagaaagggaaatcattggtccaaagattgt
attccatcagctgatttttggctggctcaggaggatgcaatactatgtgctgttgttcat
gaatatggccctaactggagtttggttagtgatattcttaatagcatgactgctggtggg
tcatacagggggagatatcgacatcctgtccattgctgtgagcggtttagagaactattc
cagaagaatgtcttgttgatggacaatgcaaataatgagaagatcatcactcctggttct
ggaaaggctcttcttaaagttacagaggataacatacggatgctgttagatgttgcttct
gagcaggtaaatagggagttgctgctgcagaagcatttttttgcattgctttcatctgcc
tggaaggtggcatcacatgttgaccgcaggcaaaatccatcacccacctgtaatggtctc
tatttcgatcagagtcattttacttccatatgccagccttcgcaaaattccttgaagaaa
tcctctgaaaggatgccatttgcaaatttggcccagagtaagaagttagtagcagctgca
cttgatgataccacatctgggcaagtgaatgacagagtcatcctctctaaccaaggagac
ggcatgccaatgagtgcagatcagctggatataactctggaattcccaaaagaggagagt
gatgtcttagctttgtttccttctgttataaatttatcgatacatgggactgaaccagca
gcatctttaagtaagcaaacaggagaagatgactttaaagttggtctgttcattgctgag
aatcgtttcagggaggcaacaagaatttgtgaagaagacatctctggatgggcatcatct
gcgttcccaaccagcgatgcaagatctcgacctggatccaggatacaatcatctggaaag
cagaagtcttccatatctgactctgctaagccttctaggtcgaagtccaaaagagcttca
attgatcctagcgaaatgcctcaccatcaggctgactcaatattccagtcagtgccatca
cttaaggatctgagatttgatcttgcatcgttcactacagatgaagttggacttaatgct
gtggatagatgtttcccttttgacttgaatggggaaagttcatgggaaatggagggtgtt
ggaatgatcccacatgattatgttactggtttaatctcagaccttgatgatttgtacttc
atttcctga
DBGET
integrated database retrieval system
