Phaseolus vulgaris (common bean): 137831450
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Entry
137831450 CDS
T03093
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic isoform X1
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu00730
Thiamine metabolism
pvu01100
Metabolic pathways
pvu01240
Biosynthesis of cofactors
Module
pvu_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
137831450
Enzymes [BR:
pvu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
137831450
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
137831450
NCBI-ProteinID:
XP_068495231
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Position
6:complement(17590092..17596384)
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AA seq
650 aa
AA seq
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MASVHANVTSLVCKNGNHASQSKFPSSTFLPGFDVVGRVSSAWKKELVPSSMALVPRATL
TFDPPTSNSGKTKQKKHTVDPASPDFLPLPSFEQCFPKSTKEHRDVIHEETGHVLKVPFR
RVHLSGDEGHFDTYDTSGPQNINPRIGLPKLREEWVDRRQKLGSPRFTQMYYAKQGIITE
EMLYCAAREKLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVAS
SIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSSVPVGTVPIYQALEKVDGIA
ENLTWEVFRDTLIEQAEQGVDYFTIHAGVLLKYIPLTAKRMTGIVSRGGSIHAKWCLAYH
KENFAYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWEKD
VQVMNEGPGHVPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGA
LGTALLCYVTPKEHLGLPNRDDVKVGVIAYKIAAHAADLAKGHPHAQAWDDALSKARFEF
RWMDQFALSLDPMTAMSFHDETLPSDGAKVAHFCSMCGPKFCSMKITEDVRKYAEKYGYG
TAEEALQRGMDAMSAEFQAAKKTISGEQHGEAGGEIYLPEAYVKSKDRTT
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagtgcatgctaatgtgacatcacttgtttgcaagaatggcaaccatgcttct
caatcgaaatttccaagttctacattcttgcccggatttgatgttgttggacgtgtttca
agtgcttggaagaaggaacttgttccatcttccatggccttggtacctagagccacatta
acatttgatcctccaactagcaattcaggcaaaaccaaacaaaagaagcacactgttgac
cctgcttctcctgattttcttcctcttccgtcctttgaacagtgctttccaaagagcact
aaagaacacagggatgtcattcatgaagaaactggtcatgtgctcaaagttccctttcgt
cgagttcacctgtctggggatgaaggacactttgacacctatgacactagtggtccccaa
aatataaacccaaggataggactcccaaagttacgcgaagagtgggttgataggaggcag
aaattaggttcaccaagattcactcagatgtactatgccaagcagggaatcatcactgag
gagatgctttattgtgctgctcgtgagaagcttgacccagagtttgtgaggtcagaagtt
gctcgtggacgtgctatcattccttcaaacaaaaaacacttggagttagaacccatgatt
gttggaagaaactttttggtgaaagtgaatgccaacattggaaattctgcagttgcaagc
tccatagaggaggaggtttacaaggttcaatgggcaactatgtggggagctgatacagtc
atggatctctcaactggtcgtcatattcacgaaactcgagagtggatcttacgcaactcc
tctgtacccgttgggactgtacctatttatcaagcacttgaaaaagttgatggaattgct
gaaaatcttacctgggaggttttcagggacaccctgattgaacaagctgaacagggtgta
gattacttcaccatccatgcaggagttcttctgaaatatattccattaacagcaaaacgc
atgacaggaattgtgtccaggggaggatctattcatgctaagtggtgcttagcttatcac
aaagagaattttgcatatgagcactgggatgacatacttgacatctgcaatcagtatgat
gtggccctatccattggtgatggtctaagacctggatccatctacgatgcaaatgacaca
gctcaatttgctgaactcttgactcaaggagaactgacccgtagagcatgggaaaaggat
gtgcaggtgatgaatgaaggacctggacatgtcccaatgcacaagattcctgaaaacatg
cagaaacagttagaatggtgtaatgaagcacctttttacactcttggtcctttaacaact
gatattgcccctggctatgatcacattacctctgcaatcggtgctgcaaatattggggca
cttggtacagctcttctatgttatgtgactccaaaagaacaccttgggttgccaaaccgg
gatgatgtgaaggttggagttatagcttacaagatagcagctcatgcagctgatttagcc
aaaggtcatccacatgctcaagcctgggatgatgcattaagcaaggcaagatttgaattt
cgatggatggatcagtttgctttgtcattggatccaatgactgccatgtccttccatgat
gaaactttgccatcagatggtgcgaaagtggcccatttctgttcaatgtgtggccctaaa
ttctgctctatgaagataacagaagatgttagaaagtatgctgagaaatatggctatgga
actgctgaggaagctttgcagcgtgggatggatgctatgagtgctgaatttcaagctgcc
aaaaaaactatcagtggtgagcaacatggtgaagctggtggagagatttacttgccagaa
gcttacgtaaaatccaaagataggactacataa
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