KEGG   Phaseolus vulgaris (common bean): 137831597
Entry
137831597         CDS       T03093                                 
Name
(RefSeq) uncharacterized protein
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    137831597
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvu03019]
    137831597
   03400 DNA repair and recombination proteins [BR:pvu03400]
    137831597
Enzymes [BR:pvu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     137831597
Messenger RNA biogenesis [BR:pvu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     137831597
DNA repair and recombination proteins [BR:pvu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      137831597
SSDB
Motif
Pfam: DEAD RQC Helicase_C HTH_40 RecQ_Zn_bind HRDC ResIII
Other DBs
NCBI-GeneID: 137831597
NCBI-ProteinID: XP_068495437
LinkDB
Position
6:19468802..19478760
AA seq 926 aa
MVVSLPLLPTMETIPSVLKKYFGFSDFRPYQREVIEKIVEKRDCLVVMATGSGKSLCYQV
PPLVVKKTGIVVSPLISLMQDQVMALKQRGIKAEYLGSAQKDFTVHSKAERGQFDILFMT
PEKACTVPTSFWSNLLKAGISLLAVDEAHCISEWGHDFRVEYKHLDKLREVLLDVPFVGL
TATATEKVRFDIISSLKMDNPYVTIGSFDRTNLFYGVKLLNRGQSFIDELVREISKEVAT
GGSTIIYCTTIKDVEQIFKSFTEAGIEAGMYHGQMNGKDREESHRLFVRDELQVMVATIA
FGMGIDKPNIRQVIHYGCPKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKGDFYCGDV
KSEKQRKAVMESLLAAEHYCVLTTCRRKYLLEYFGEKNSADRCGNCDNCKVSKEERDMSR
EAFLLMACIHSCKGRWGLNMPIDVLRGSRVKKILEAQFDKLPLHGLGKNYPANWWKSLGH
QLISRGYLKETVSDVYRTISVSSKGEQFLASSTPDYQPPLILTLTAEMLGEEDNGNTQEE
FKTLSTSELEGFSEAEKTFHQMLLEERLELARSVGTAPYAICGDQTIRKISLTRPSTKAR
LANINGVNQHLVTKYGDHFLQVILKLSQGLNLSLDGEEKVPMASLQTNGVTKVSPLTNKS
KKLTSAKFEAWKKWHEDGLSIHEIANLEARSAPIKEQTVAEYLLEAAQEGLPFDWVRFSK
MIGLTQEIISEIQGAISKVGSTDKLKPIKNELPEDISYQHIKTYLSMRNSGISLETFQSG
SNQTGKDDELAYNASNFPDSTLETCPDRHCEDGISAKSLAEQCDLEMDEVPLPVNSSEEQ
KLSNASEGEFTRKRQKVSETNEENSTKLKATESSVVEWMKNLDEGATLSTILEHFNGSSE
DSVVELINGLECDFLIYRKGNVYRVL
NT seq 2781 nt   +upstreamnt  +downstreamnt
atggtggtttctcttcctctcctccccaccatggagaccattccctctgttctcaagaaa
tactttgggttttctgattttcggccttatcagagagaagttattgagaaaattgttgag
aaaagggattgtttggtagtcatggctactggcagtgggaagtcattgtgctatcaggta
cctcccttggttgttaaaaagactgggatagttgtgagccctctgatatcgttgatgcaa
gaccaggtgatggctttaaaacaacgaggtatcaaagctgaatatcttggaagtgctcag
aaggatttcactgtgcactctaaagctgaacgtggtcaatttgacattctgttcatgact
cctgagaaggcatgcacagttcctaccagtttctggtccaacttactaaaggctggaatt
agtcttcttgctgttgatgaagcccattgcatatcggaatggggacatgattttagggtg
gaatacaagcatttagacaagttacgtgaggtcttgcttgatgttccttttgttggtcta
actgccactgctactgaaaaggttcgatttgacatcatcagttccctgaagatggataac
ccttatgttacaattggttcatttgatcgcacaaatcttttctatggtgtcaaactattg
aaccgtggacaatcttttattgatgagcttgtgcgggaaatttcaaaagaagttgctact
ggtggttcaactataatttattgcacaacaatcaaagatgtagagcagatattcaagtca
tttacagaagcaggcattgaggcaggaatgtaccatggccaaatgaatggaaaagatcga
gaggagtctcatagattatttgttagagatgaactgcaagttatggtggcaaccattgcc
tttggcatgggcatagataaacctaacattagacaagtgattcactatggttgccctaaa
agtcttgagtcctactaccaggaaagtggacgatgtggtagagatggtatagcttcggtt
tgttggctttactacacaagaagtgactttgcaaagggcgacttttactgtggagatgta
aaatcagaaaaacaaagaaaagctgttatggagtcattgcttgctgctgaacactattgt
gtgctgaccacatgcagaagaaagtacttgcttgaatactttggggaaaaaaattcagct
gatagatgcggtaactgtgataattgcaaagtctcaaaggaggagcgtgacatgtcaagg
gaagcatttcttctaatggcttgcattcattcatgcaagggcagatggggccttaatatg
cctattgatgtcctgcgtgggtctcgagtcaagaaaattctagaggctcaatttgataag
cttccacttcatgggctggggaaaaattatccagcaaattggtggaaatcacttgggcat
caattgatttctcgaggttatttgaaggagactgttagtgacgtctatagaactataagt
gtcagttcgaaaggagagcagtttttggcctcttctacaccagattatcaacctcctttg
attttgacattaactgctgaaatgcttggagaagaagataatggaaacacacaagaagaa
ttcaaaactttatccacttcagaattagaaggtttttcagaggctgagaaaacgttccac
caaatgcttttggaagaaagattagagcttgcaagaagtgttggaacagctccatatgct
atatgtggtgatcaaacgatcaggaaaatttctttgacaagaccatctacaaaagcaaga
ctagcaaacattaatggtgtaaatcagcacctagttacaaaatatggagatcattttctt
caagttattctgaaactgtcgcaaggattaaacctatcattggatggggaagaaaaggtt
ccaatggctagtttgcaaactaatggagtaacgaaagtatctccactaaccaacaaatcc
aagaagttgacatcagcaaagtttgaagcatggaaaaaatggcatgaagatggtctttct
attcacgagatagctaacttagaagctagatcggctcctataaaagaacaaactgttgct
gaatatctgctggaagctgctcaagaaggattaccttttgattgggttagattcagcaag
atgataggactgacacaagagatcatatcagaaattcagggtgctatttcaaaagttgga
tctacagacaagctgaagcctataaaaaatgaattgccagaagatataagttatcagcac
atcaagacttatttgtcaatgcgaaactctggtatatccttggaaacatttcaatctgga
agtaaccagactgggaaagatgatgaacttgcatacaatgcttcaaattttccagactct
actttagaaacatgtcccgacagacattgtgaagatggcatttctgcaaaaagtttggct
gaacaatgcgacttggaaatggatgaggtacctttacctgtgaacagttctgaggaacag
aagctctcaaatgccagtgaaggggaattcacaagaaaacgacaaaaggtcagtgaaacg
aatgaagaaaattcaactaaattgaaagctacagagagttctgttgtggagtggatgaag
aaccttgatgaaggggctacgttgagcactattttggaacacttcaatggatccagtgaa
gattctgtggttgaactgataaatggcctagagtgtgactttttaatatataggaaaggg
aacgtgtatagggttttgtaa

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