Phaseolus vulgaris (common bean): 137831597
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Entry
137831597 CDS
T03093
Name
(RefSeq) uncharacterized protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137831597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
137831597
03400 DNA repair and recombination proteins [BR:
pvu03400
]
137831597
Enzymes [BR:
pvu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
137831597
Messenger RNA biogenesis [BR:
pvu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
137831597
DNA repair and recombination proteins [BR:
pvu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
137831597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HTH_40
RecQ_Zn_bind
HRDC
ResIII
Motif
Other DBs
NCBI-GeneID:
137831597
NCBI-ProteinID:
XP_068495437
LinkDB
All DBs
Position
6:19468802..19478760
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AA seq
926 aa
AA seq
DB search
MVVSLPLLPTMETIPSVLKKYFGFSDFRPYQREVIEKIVEKRDCLVVMATGSGKSLCYQV
PPLVVKKTGIVVSPLISLMQDQVMALKQRGIKAEYLGSAQKDFTVHSKAERGQFDILFMT
PEKACTVPTSFWSNLLKAGISLLAVDEAHCISEWGHDFRVEYKHLDKLREVLLDVPFVGL
TATATEKVRFDIISSLKMDNPYVTIGSFDRTNLFYGVKLLNRGQSFIDELVREISKEVAT
GGSTIIYCTTIKDVEQIFKSFTEAGIEAGMYHGQMNGKDREESHRLFVRDELQVMVATIA
FGMGIDKPNIRQVIHYGCPKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKGDFYCGDV
KSEKQRKAVMESLLAAEHYCVLTTCRRKYLLEYFGEKNSADRCGNCDNCKVSKEERDMSR
EAFLLMACIHSCKGRWGLNMPIDVLRGSRVKKILEAQFDKLPLHGLGKNYPANWWKSLGH
QLISRGYLKETVSDVYRTISVSSKGEQFLASSTPDYQPPLILTLTAEMLGEEDNGNTQEE
FKTLSTSELEGFSEAEKTFHQMLLEERLELARSVGTAPYAICGDQTIRKISLTRPSTKAR
LANINGVNQHLVTKYGDHFLQVILKLSQGLNLSLDGEEKVPMASLQTNGVTKVSPLTNKS
KKLTSAKFEAWKKWHEDGLSIHEIANLEARSAPIKEQTVAEYLLEAAQEGLPFDWVRFSK
MIGLTQEIISEIQGAISKVGSTDKLKPIKNELPEDISYQHIKTYLSMRNSGISLETFQSG
SNQTGKDDELAYNASNFPDSTLETCPDRHCEDGISAKSLAEQCDLEMDEVPLPVNSSEEQ
KLSNASEGEFTRKRQKVSETNEENSTKLKATESSVVEWMKNLDEGATLSTILEHFNGSSE
DSVVELINGLECDFLIYRKGNVYRVL
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggtggtttctcttcctctcctccccaccatggagaccattccctctgttctcaagaaa
tactttgggttttctgattttcggccttatcagagagaagttattgagaaaattgttgag
aaaagggattgtttggtagtcatggctactggcagtgggaagtcattgtgctatcaggta
cctcccttggttgttaaaaagactgggatagttgtgagccctctgatatcgttgatgcaa
gaccaggtgatggctttaaaacaacgaggtatcaaagctgaatatcttggaagtgctcag
aaggatttcactgtgcactctaaagctgaacgtggtcaatttgacattctgttcatgact
cctgagaaggcatgcacagttcctaccagtttctggtccaacttactaaaggctggaatt
agtcttcttgctgttgatgaagcccattgcatatcggaatggggacatgattttagggtg
gaatacaagcatttagacaagttacgtgaggtcttgcttgatgttccttttgttggtcta
actgccactgctactgaaaaggttcgatttgacatcatcagttccctgaagatggataac
ccttatgttacaattggttcatttgatcgcacaaatcttttctatggtgtcaaactattg
aaccgtggacaatcttttattgatgagcttgtgcgggaaatttcaaaagaagttgctact
ggtggttcaactataatttattgcacaacaatcaaagatgtagagcagatattcaagtca
tttacagaagcaggcattgaggcaggaatgtaccatggccaaatgaatggaaaagatcga
gaggagtctcatagattatttgttagagatgaactgcaagttatggtggcaaccattgcc
tttggcatgggcatagataaacctaacattagacaagtgattcactatggttgccctaaa
agtcttgagtcctactaccaggaaagtggacgatgtggtagagatggtatagcttcggtt
tgttggctttactacacaagaagtgactttgcaaagggcgacttttactgtggagatgta
aaatcagaaaaacaaagaaaagctgttatggagtcattgcttgctgctgaacactattgt
gtgctgaccacatgcagaagaaagtacttgcttgaatactttggggaaaaaaattcagct
gatagatgcggtaactgtgataattgcaaagtctcaaaggaggagcgtgacatgtcaagg
gaagcatttcttctaatggcttgcattcattcatgcaagggcagatggggccttaatatg
cctattgatgtcctgcgtgggtctcgagtcaagaaaattctagaggctcaatttgataag
cttccacttcatgggctggggaaaaattatccagcaaattggtggaaatcacttgggcat
caattgatttctcgaggttatttgaaggagactgttagtgacgtctatagaactataagt
gtcagttcgaaaggagagcagtttttggcctcttctacaccagattatcaacctcctttg
attttgacattaactgctgaaatgcttggagaagaagataatggaaacacacaagaagaa
ttcaaaactttatccacttcagaattagaaggtttttcagaggctgagaaaacgttccac
caaatgcttttggaagaaagattagagcttgcaagaagtgttggaacagctccatatgct
atatgtggtgatcaaacgatcaggaaaatttctttgacaagaccatctacaaaagcaaga
ctagcaaacattaatggtgtaaatcagcacctagttacaaaatatggagatcattttctt
caagttattctgaaactgtcgcaaggattaaacctatcattggatggggaagaaaaggtt
ccaatggctagtttgcaaactaatggagtaacgaaagtatctccactaaccaacaaatcc
aagaagttgacatcagcaaagtttgaagcatggaaaaaatggcatgaagatggtctttct
attcacgagatagctaacttagaagctagatcggctcctataaaagaacaaactgttgct
gaatatctgctggaagctgctcaagaaggattaccttttgattgggttagattcagcaag
atgataggactgacacaagagatcatatcagaaattcagggtgctatttcaaaagttgga
tctacagacaagctgaagcctataaaaaatgaattgccagaagatataagttatcagcac
atcaagacttatttgtcaatgcgaaactctggtatatccttggaaacatttcaatctgga
agtaaccagactgggaaagatgatgaacttgcatacaatgcttcaaattttccagactct
actttagaaacatgtcccgacagacattgtgaagatggcatttctgcaaaaagtttggct
gaacaatgcgacttggaaatggatgaggtacctttacctgtgaacagttctgaggaacag
aagctctcaaatgccagtgaaggggaattcacaagaaaacgacaaaaggtcagtgaaacg
aatgaagaaaattcaactaaattgaaagctacagagagttctgttgtggagtggatgaag
aaccttgatgaaggggctacgttgagcactattttggaacacttcaatggatccagtgaa
gattctgtggttgaactgataaatggcctagagtgtgactttttaatatataggaaaggg
aacgtgtatagggttttgtaa
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