Phaseolus vulgaris (common bean): 137832173
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Entry
137832173 CDS
T03093
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
137832173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvu03021
]
137832173
Transcription machinery [BR:
pvu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
137832173
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
137832173
NCBI-ProteinID:
XP_068496303
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Position
6:24945873..24952094
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AA seq
540 aa
AA seq
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MSTDLQLKSSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENRAKCVDCGVTLTRLIREYN
VRASSTNDKNYFIGRFMTGLPDFSKKKSAENKWALQKEGLLGRQITDTLREKYKNKPWLL
EDETGQSQYQGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRKKTADGYQRWMMKAANNGPAAFGDHGKFDEKESNTGGGRSRKKTGEEEEGHVSDKGE
EDEDDESERKNRLGLYKRPADDDEEGPRGGDHDLEDDDVEKGDDWEHEEIFTDDDEAVGN
DPEEREDLAPEVPAPPEIKQDEEEEDEDNEEGGGLSKSGKELKKLLGKASGLNESDAEDE
DDDDDDMDDEVGNPPVIATKTKDAPKEEPVDNSPSKPTATGPARGTPSSKSSKGKRKSNE
EVKPTNTATPKKVKQENEPKSSAKDVNGSASKSNAPPKGTPPSSSSKPGSSATASGPVSE
EEIRAVLRQKTPVTTQDLVAKFKARLRSSEDKQAFAEILKRISKIQKTANGSSYVILRDK
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggacctgcaattgaaatcgagttgtagcggatgcggatcaacgacggatctc
tacggaagcaattgcaagcacatgactctgtgcttgagctgcggcaaaaccatggcggag
aaccgcgccaaatgcgtcgattgtggtgtcacccttactcgcctgattcgagaatataat
gttcgtgcaagttctaccaatgacaagaactactttattggaaggttcatgaccggttta
ccagatttttcgaagaagaaaagtgctgagaacaagtgggctctgcagaaggaaggactg
ctcggtcgccaaattactgatactttgcgggagaagtacaagaacaagccttggctcttg
gaggacgaaacaggtcagtcccagtaccagggtcatctagaaggttcacaatcggctaca
tattacctgctaatgaaggaaaggaaggaatttgttgccattcctgctggttcttggtac
aactttaacaaggttgctcaatataagcaattgacattggaggaagctgaagagaagatg
aagaatagaaagaaaactgcagatggatatcagagatggatgatgaaagcagcaaataat
ggcccagctgcatttggtgatcatggaaaatttgatgagaaggaaagcaacacaggtgga
gggagaagccgtaaaaaaaccggtgaggaggaagaaggtcatgtttctgataagggagag
gaggatgaagacgacgaatctgaaaggaagaatagacttgggctttataaaagacctgct
gatgatgatgaagaaggtccaaggggaggggatcatgatctagaggatgacgatgttgag
aagggtgatgactgggagcatgaggagattttcactgatgacgatgaagctgttggaaat
gatcccgaggaaagggaggatttggctcctgaggttcctgctcctcctgaaatcaaacag
gatgaggaggaggaggatgaagataatgaagaagggggaggtctgagcaaatctgggaaa
gagctgaagaagctgcttgggaaagctagtggtctgaatgaatctgatgcagaggatgaa
gatgacgacgatgacgatatggatgatgaggttggcaatcctcctgtgattgctacgaag
actaaggatgcccctaaggaagaacctgttgacaacagcccttcaaagccaacagcaaca
ggacctgctcgtggaacaccatcttcaaagtcttcaaagggaaagagaaaatcaaatgaa
gaagtaaaaccaactaatactgcaacaccaaagaaggtgaagcaggaaaatgaaccaaag
tcgtctgccaaagatgtaaatggatctgcatctaaaagtaatgcacctcccaaaggtaca
cctccatcatcatcatcaaaacctgggtcttccgcaacagcttctggacctgtgagtgag
gaagaaattagggctgttttaaggcagaagactccagtgaccactcaggatcttgtagct
aaatttaaggcaagactaagatcttcggaggataagcaagcatttgctgagatcctgaag
agaatctctaaaatacagaagactgcaaatggatccagttatgttatcctgagagacaag
tga
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