Phaseolus vulgaris (common bean): 137832208
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Entry
137832208 CDS
T03093
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137832208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
137832208
Messenger RNA biogenesis [BR:
pvu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
137832208
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
137832208
NCBI-ProteinID:
XP_068496350
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Position
6:25279539..25282874
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AA seq
200 aa
AA seq
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MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN
HPHILLLQIGNTFCKLPGGRLKPGENEMEGLKRKLTSKLGANSPALVPDWQIGECVAIWW
RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
PVISTIPQQLSRFQFKMITN
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcgtcccaagttgtgaatacatacccgttgtcgagctacacgtttggcacaaag
gagcccaagatggagaaagacacctccgtcgcggatcgtctcgctcgcatgaaagtcaac
tatatgaaggagggaatgaggaccagtgtcgaaggaattttactggtacaagaacataat
catccacatatacttcttctgcaaattggaaacacattttgcaaactccccggtgggcgt
ctcaaaccaggagagaatgaaatggagggcttgaagagaaagttgactagcaagcttggt
gctaattcaccggctcttgtgcctgactggcagataggtgagtgtgttgcaatctggtgg
aggccaaattttgaaaccataatgtatccatactgcccccctcatatcacaaaacccaag
gagtgcaaaaaacttttccttgttcacttatctgaaagggaatactttgccgtgcccaaa
aatttaaaactacttgctgttccattgtttgaactctatgacaatgttcagagatacggt
ccagttatatccaccattcctcagcagctatccagattccagtttaaaatgatcactaat
tga
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