Phaseolus vulgaris (common bean): 137832525
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Entry
137832525 CDS
T03093
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvu03041
]
137832525
Enzymes [BR:
pvu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137832525
Spliceosome [BR:
pvu03041
]
Complex C
Other components
Complex C specific factors
137832525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
AAA_22
DEAD
HA2_N
AAA_19
AAA_30
AAA_7
nSTAND3
ResIII
AAA_29
AAA_23
AAA_11
Motif
Other DBs
NCBI-GeneID:
137832525
NCBI-ProteinID:
XP_068496826
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All DBs
Position
6:complement(28119673..28132241)
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AA seq
699 aa
AA seq
DB search
MSQFWKPGTERPQGRVVDDEEGGVLFLSGSHHSSSSRHGYASMEKQRQRLPVFKYRTAIL
YLVETHATTIIVGETGSGKTTQIPQYLKEAGWAAGGRLIACTQPRRLAVQAVASRVAEEM
GVKLGEEVGYTIRFEDVTKPDVTVLKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSIS
TDILLGLLKKIQRRRPELRLIISSATIEAKSMSDFFQMRKKRREPENKDHGPQVEPAILS
VEGRGFNVQINYAEEPVQDYVQAAVSTTLLIHQREPVGDVLVFLTGQDDIDAAVQLLTDE
VQTTGKHSSGLIVLPLYSGLPRADQELVFSPSPRGKRKVVISTNIAETSLTLEGIVYVVD
SGFSKQRFYNPISDIENLVVAPISRASARQRTGRAGRVRPGKCYRLYTEEYFLNHMPNEG
IPEIQRSNMVSCVIQLKALGIDNILGFDWPASPSAEAMIRALEVLYSLGVLDDDAKLTSP
TGFQVAEIPLDPMVSKMIIASSQLGCSEEIITIAAVLSVQSIWISGRGIQKESDEAKLRF
AAAEGDHVTFLNVYKGFHQSGKSSQWCHKNFVNYQAMRKVLEVREQLKRIAKRIGLVLKS
CESDMELVRKAVTAGFFANACHLEAYSHDGMYKTLRGSQEVYIHPSSVLFRVNPKWVIYY
SLVSTDRQYMRNVITIDPSCLLDAAPHFYKMQQSNHLLY
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagttctggaaaccagggacggagaggccacagggtcgcgtagtcgacgatgaa
gaaggtggtgttctcttcttgtctggttctcaccattcctcttcctcaagacatggctac
gccagcatggagaagcaacgccagcgattgcctgtgttcaagtaccgcaccgccattcta
tacctcgtcgagactcacgccaccaccatcatcgtcggcgaaaccggcagcggaaaaacc
actcaaattcctcagtacctgaaagaagcaggttgggccgccggtggcagactcattgct
tgtactcaacctagacgacttgccgttcaggctgttgcttccagagttgccgaagagatg
ggagtaaagcttggtgaagaagttggctacacgataaggtttgaagatgtaaccaaaccg
gatgtaacggttctaaaatttttaactgatggagtactcctaagggagatgatggacgat
cctcttttgaccaaatatagtgttataatggtggatgaggctcatgaaagatcaatatca
actgacattctgcttggactattgaaaaagattcaacgtcgtcgaccagagttgcggttg
attatctcatctgctaccattgaagcaaagtcgatgtctgacttcttccaaatgagaaaa
aagcgccgagagcccgaaaacaaggatcatggaccacaagtggaacctgcaatcttatca
gttgagggtagaggcttcaatgtacaaattaattatgctgaggaacctgtccaagactat
gttcaggctgctgtttcaacgacactcttgatccaccagcgggagcctgtaggagacgtt
ctagtattccttaccggccaagatgatattgatgcggctgttcagctactcactgacgaa
gtacaaactactggaaaacactcttcaggattgattgttttgcctctgtattcaggactt
ccacgtgctgatcaggagttagtgttttctccatctcctcgtggaaagaggaaagtagta
atttctactaatatagcagaaacatcactcacattagagggaatcgtctatgttgttgac
agtgggttttctaaacagcggttctacaatccgatttctgatattgaaaatctggttgtg
gcacctatatctagggcttctgctagacaaagaactggcagggctgggcgagttcgacca
ggaaagtgttacaggctatatacggaagagtattttcttaaccacatgcctaatgaggga
attccagagatacagagatcaaatatggtctcctgcgtaatccagttaaaggccttgggg
attgataatatcttgggctttgactggccagcatctccatctgctgaagcaatgatccgt
gctcttgaagttctctactcacttggtgtattggatgatgatgctaagctgacttcacca
actggatttcaagttgctgagattccacttgatccgatggtctcaaaaatgataatagct
tccagtcaacttgggtgttcagaggagataatcaccattgcggctgttctttccgtccaa
tccatctggatctcagggagagggatacaaaaggaatcagatgaagcaaaattgagattt
gctgctgccgagggtgaccatgtaacgttccttaatgtatacaaggggtttcatcaatct
ggtaaatcttcacagtggtgtcacaagaactttgttaactatcaggccatgagaaaggtt
cttgaagttagagagcaactcaaaagaattgcaaagaggataggattagtcttaaaatca
tgtgagagtgatatggagttagtgagaaaagctgtcactgccggattttttgcaaatgcg
tgtcatctagaggcatacagtcatgatgggatgtataagacgttaagaggatcacaggag
gtttatattcacccgtcgtcagtgctattcagagtaaatccaaaatgggtcatttactat
tctcttgtatcaactgatcgacaatacatgcgtaatgtcataactatagacccctcgtgc
ttactggatgctgctcctcacttctacaagatgcaacaatctaatcatctcctttattga
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