Phaseolus vulgaris (common bean): 137832641
Help
Entry
137832641 CDS
T03093
Name
(RefSeq) uncharacterized protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137832641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
137832641
03041 Spliceosome [BR:
pvu03041
]
137832641
Messenger RNA biogenesis [BR:
pvu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
137832641
Spliceosome [BR:
pvu03041
]
Complex B
Other components
Prp19-related factors
137832641
Complex C
137832641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_15
Mad3_BUB1_I
TPR_19
ARM_TT21_C
ARM_TT21
NRDE-2
UTP6_C
Motif
Other DBs
NCBI-GeneID:
137832641
NCBI-ProteinID:
XP_068497022
LinkDB
All DBs
Position
6:complement(29119767..29126335)
Genome browser
AA seq
916 aa
AA seq
DB search
MAIAQDLYPSEDDLLYEEELLRNPFSLKLWWRYLIARSEAPFKKRFVIYERALKALPGSY
KLWHAYLRERLDLVRNLPVTHSQYDTLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR
TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPSHIEDFIEFL
LNSNLWQEASDRLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHANEVSGLNVDAIIRGG
IRKFTDEVGRLWTSLAEYYIRRGLHEKARDVFEEGMSTVITVRDFSVIFDSYSQFEESML
AYKMEEMGLSDEEDEGEENGFEDVKEEDIRFRGRLAEEDFERKILHGFWLNDKNDIDLRL
ARFDYLMERRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTIDPMKAV
GKPHTLWVAFAKLYEQHKDLANARVIFDKAVQVNYKTVDNLASVWCEWAEMELKHKNFKG
ALELMRRATAEPSVEVKRKVAADGNEPVQMKLHKSLRLWTFYVDLEESLGSLESTRAVYE
RILDLRIATPQIIINYAYFMEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRY
GKNKLERARELFENAVESAPADQVKPLYLQYAKLEEDYGLAKRAMKVYDRATKAVPNNEK
LSMYEIYISRAAEIFGVPKTREIYEQAIESGLPDKDVKTMCLKYAELEKSLGEIDRARGI
YGFASQYADPRSDPEFWNKWQEFEIQHGNEDTFREMLRISRSISASYSQTHFILPEYLMH
KDQAVILDEAKDKLKKAGIPEDEMAALERQLAPESDNTVTKDRKVGFVSAGVESQSDGGI
KTSANNEDIELPEDSDSDDGDDKIEIAQKDVPSAVFGGLIRKRDEDEKNGEIDAAKDKDN
ENRLGALERIKRLKRN
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggccattgcgcaagatttgtatccctcagaagacgaccttttgtacgaagaggagttg
cttcgaaaccctttcagccttaagctatggtggcgttacctaattgcgcgttcggaagct
ccgttcaagaagcgcttcgtcatttacgagagggcactgaaagcgcttcccggaagctac
aagctgtggcacgcctaccttcgggagcgcctcgacctcgttcgcaacctccccgttact
cactctcaatacgacacgctcaataacaccttcgagcgtgccttagtcaccatgcacaag
atgccgcgaatttggattatgtatctgcaaaccctaaccaatcagaaattggtaactcgg
actcgcaggaccttcgacagggctctctgcgccctcccagtcacccagcacgatcgtatc
tgggaaccttatcttgtgttcgtgagccagaagggtattcccattgagacttctcttcgg
gtttatcgcaggtatttgaagtatgatccctctcacattgaggattttattgagtttttg
cttaattcgaatctctggcaagaggcttctgataggctggcttcggtgctcaatgacgac
cagttttactccattaagggtaagaccaagcaccggctttggttggagttgtgtgatttg
ctcacacgccatgccaatgaggtttctgggttgaatgtggatgctatcattaggggtggg
attaggaagttcactgatgaggtgggtaggctttggacttcgcttgctgagtactacatt
aggaggggtttgcatgagaaggctagggatgtgtttgaggagggtatgtctactgttatc
acggtcagggattttagtgttatatttgattcttactcgcagtttgaagagagcatgctt
gcttacaagatggaggagatggggttgagtgacgaagaagatgagggtgaagaaaatggc
tttgaggatgtaaaagaagaggatattcgtttcagaggaagattggcggaggaggatttt
gagaggaagattttacatgggttttggttgaatgacaagaatgacatagacttgaggttg
gctcggtttgattaccttatggagaggaggccagagttggctaacagtgtgcttttgcgt
caaaatcctcataatgtagaacagtggcacaggagggtgaaactctttgaagggaatcct
accaagcagatactgacttacactgaagcggtgaggacgattgatcccatgaaggcagtg
ggaaagcctcatactttgtgggttgcgtttgcgaaactgtatgagcagcacaaagatctt
gccaatgcccgtgtcatatttgacaaggcagtgcaggtgaactacaaaactgtggataat
ctggctagtgtctggtgtgagtgggctgaaatggagttaaagcataaaaatttcaaagga
gcacttgagctgatgaggcgggctacagctgagccatcagttgaggtgaagcgtaaagtg
gctgcggatggaaatgaaccagtccagatgaagctacataaatccttgagattgtggaca
ttttatgtggatttggaggaaagcctaggttctttggaatctacacgtgctgtttatgag
cgaattttggatttacgaatagccacaccacaaataataatcaattatgcatactttatg
gaggaacataagtactttgaagatgcttttaaagtttatgaaagaggagtaaagatattt
aagtaccctcatgttaaagacatatgggttacttatctctctaaatttgtgaagagatat
ggaaagaataaattggagcgagcaagagaattatttgaaaatgcagttgaatcggcccca
gctgatcaagtaaagccgctttacctgcaatatgccaaactggaggaggactatggccta
gcaaagcgagctatgaaggtttatgatcgagcaacaaaagctgttcctaacaatgagaag
ttaagcatgtatgaaatatatatttctcgtgcggctgagatatttggtgtgcccaaaaca
agggagatctatgagcaggcaattgaatctggtcttccggataaggatgtcaaaaccatg
tgtttgaagtatgctgagctggaaaaaagcttgggagaaattgaccgggcccgtggaata
tatggatttgcatctcaatatgcagatccacgatctgatcctgagttttggaataagtgg
caagagtttgagattcaacacgggaatgaagatactttcagagaaatgcttcgtattagt
cgaagtatatctgcaagctacagccagacacattttatactgcccgagtatctaatgcat
aaggatcaagctgtgattcttgatgaagccaaggacaagttgaaaaaggctgggatccct
gaggacgaaatggctgctttagaaaggcaattagcaccagaatctgacaatacagtgaca
aaagatagaaaagttgggtttgtgagtgctggagtggaatctcagtctgatggagggata
aaaactagtgcaaataacgaggatatcgagttaccagaagacagtgattctgatgacggt
gatgataagattgaaattgcacaaaaagatgttccttctgctgtgtttggtggtttgatt
agaaagagagacgaggatgaaaagaatggagagatagatgctgcaaaagataaggataat
gagaatcggcttggtgctcttgagagaataaagaggctaaaacgaaattaa
DBGET
integrated database retrieval system
