Phaseolus vulgaris (common bean): 137832922
Help
Entry
137832922 CDS
T03093
Name
(RefSeq) regulator of nonsense transcripts UPF3-like
KO
K14328
regulator of nonsense transcripts 3
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03013
Nucleocytoplasmic transport
pvu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137832922
03015 mRNA surveillance pathway
137832922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
137832922
Messenger RNA biogenesis [BR:
pvu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
137832922
mRNA cycle factors
P-body specific factors
137832922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_2
Motif
Other DBs
NCBI-GeneID:
137832922
NCBI-ProteinID:
XP_068497420
LinkDB
All DBs
Position
6:complement(31098013..31104714)
Genome browser
AA seq
513 aa
AA seq
DB search
MKGSLDRTKVVLRHLPPSLSEAALLAQIDSAFADRYNWLSFRPAKVSQKHISYSRAYIDF
KRPDDVILFAEFFNGHVFVNEKGSQFKVIVEYAPSQRVPRQWSKKDGRDGTIYKDSEYLE
FLELLAKPVENLPSAEIQLEKREAERSGAAKDTPIITPLMDFVRQKRAAKGPRRSLSNGK
VSRRGTSSNGSPSSGTSRRGSGKKRVSATMYVARHPGKNSTMKDRSIYTLVPSQGDQHIS
NKSSNVASSDGKQTLDENGFSGNSDSGKKKILLLKGKEREIIAVSDLDSMSQHHNVISSA
KEIVGATVLKQNQRQEGSGRIIRSILSKKELRQSQSSRALSEQQIQTSNLEKDKQSPRPI
QVQLILKGMNGTPDNKIGVLDSHVFSERQERHIRHKDRPDRGVWTSCSNGADESFPSAAF
SQVDPLEGSHADLKHDMPNTRSGEVKSLGGVRTSHSSENGFNKHFGRRGPTHGVKDVDGY
SVSSEGKHPRRSGTTAYGSNEKQVWVQKASSGT
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaagggttcgttggatcggacaaaggtggtgctgcgtcacttgccgccctctctttcg
gaggccgcccttttggcccaaatcgattccgccttcgctgaccgctacaactggctctct
ttccgtcctgccaaagtcagccagaagcatatatcatattctagagcctacattgacttc
aagaggccagatgacgttatactgtttgcggagttctttaatggacacgtctttgtgaat
gaaaagggatctcagttcaaagtcattgttgaatatgctccttcccaacgtgttccaaga
cagtggtctaaaaaggatggtcgcgatgggaccatatataaagattctgagtatctggag
tttcttgaactacttgccaagcctgttgagaatcttcccagcgctgagatacaattggag
aagagagaagcagaacgatctggtgctgcaaaagatactcctataattacaccactgatg
gactttgtgcgccagaaaagggctgccaagggacctcggaggtcgttatcaaatggaaaa
gtgagtagaagaggcacttcatcaaatgggagtcctagttctggcacatcaagacgaggt
tccggaaagaagagggtttctgctactatgtatgttgccaggcacccaggaaaaaattct
actatgaaagacagatcaatttatactttggttcctagccaaggtgatcagcatatttca
aataaatcttcaaacgtggcctcttcagatggaaaacaaaccctagatgagaatggattt
tctggaaatagtgattctgggaagaaaaaaatactgcttcttaaagggaaagaaagagaa
ataattgctgtatctgatttagatagcatgtcacagcatcacaatgtaatctcttcagcc
aaagaaattgttggtgcaacagttttgaagcagaatcagaggcaggaaggtagcggaagg
attatcagaagtatactctcaaaaaaggagttgcgtcaaagccaatcttccagggcactc
tctgagcagcaaatccaaacatctaatctagaaaaagataaacaatccccacggcccata
caagtgcaactaattctgaagggcatgaatggtacaccagataataagattggtgtgctt
gattcacatgtctttagcgagaggcaggagagacatattagacataaagatagaccagat
cgtggtgtttggacaagttgttccaatggagctgatgagtctttcccatctgctgctttc
tcgcaagtagatcctttggaagggagtcatgcagatttgaaacatgacatgccaaataca
agaagtggggaggtaaaatctcttggaggtgtccgtaccagtcattcatcagaaaatggc
ttcaataagcattttggtcgccgtggaccaacgcatggggtaaaggatgttgatggctat
tcagtttcaagtgaagggaagcatcctagaagatctggtaccactgcttatggttccaac
gagaaacaagtttgggttcaaaaagcaagttctggtacctag
DBGET
integrated database retrieval system
