Phaseolus vulgaris (common bean): 137834607
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Entry
137834607 CDS
T03093
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03013
Nucleocytoplasmic transport
pvu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137834607
09122 Translation
03013 Nucleocytoplasmic transport
137834607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
137834607
03041 Spliceosome [BR:
pvu03041
]
137834607
Messenger RNA biogenesis [BR:
pvu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
137834607
Spliceosome [BR:
pvu03041
]
Complex C
Other components
EJC/TREX
137834607
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137834607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
AcMNPV_Ac75
Motif
Other DBs
NCBI-GeneID:
137834607
NCBI-ProteinID:
XP_068498774
LinkDB
All DBs
Position
5:357245..369634
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AA seq
604 aa
AA seq
DB search
MEVFKRAILQPGPPENFALKTVQEVIKPQKQTKLAQDENQFLENILRMLLQEFVSAAVSA
EKIMQFGQSIDSNETTQGHIPRLLDIVLYLCEKEHIEGGMIFQLLEDLTEMSTMKNCKDV
FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER
SALNIKGVFNTSNETKFEKEPLEGICIDFNFYQTFWGLQEFFSNPTSISHAPVKWQKFTS
SLSVVLNTFEAQPLSDEEGDANNLEEEAVNFSIKYLTSSKLMGLELKDPSFRRHVLVQCL
ILFDYLKAPGKGDKDLPSENMKEEITSCEERVKKLLELTPPKGSEFLHKIEHILEREKNW
VWWKRDGCLPYEKQPIEKKAVPEGSKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVQ
TPSIMEYWKPLADDMDPSAGIEAEYHHKNNRVYCWKGLRLAARQDLEGFSKFTDHGIEGV
VPLELLPPDVRSKYQAKPNDRSKRSKKEETKGSAHQVEENQIATTATELDGDGIRTDTTA
TPMEFDGASVPGTQGGTPTPEELHKHSSDTDVGQEAGQLEAEAEVEAGIIDGETDADVDL
DTVG
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggaggtattcaaaagggccatactacaaccagggccacctgagaattttgctttgaag
acagtccaagaagtaataaagcctcagaaacaaacgaaattggcccaagatgagaaccaa
ttcctagaaaatatcttgcgcatgctgcttcaggagtttgtgtccgcggcagtatctgct
gagaaaataatgcaatttgggcaatccattgattctaacgaaactactcagggccacatt
cctcgccttcttgatattgtactatatctgtgtgagaaagaacacattgaaggtggaatg
atttttcagctgttggaagacttgacagaaatgtctacaatgaaaaactgcaaagatgtt
tttggctatatagagagtaaacaagatatattaggcaaacaagaactttttgctcgagga
aaactcgtgatgctgagaacctgcaatcaacttcttcgtcgtctatcaaaggcaaatgac
gtggtcttttgtggaagaattctcatgtttttagctcatttctttccgttatcggagcga
tcagctttaaatatcaaaggtgtttttaacacatcaaatgaaacaaaatttgagaaagaa
cccttggaaggcatatgcatagatttcaatttttatcagactttttggggtcttcaggaa
tttttttctaaccctacttccattagtcatgctccggtaaagtggcagaaattcacatct
agtttgtcggttgtattaaatacatttgaagcacaacctttgagtgatgaagaaggagat
gctaataatttggaggaagaggcagttaattttagtataaaatatcttacaagcagcaaa
ctaatgggtctagagttaaaggatccaagttttcgacgtcacgttcttgtacagtgtctt
atattgtttgattacttgaaggcccctggaaaaggtgacaaggatttgccatctgaaaac
atgaaagaagagatcacatcatgcgaggaacgggttaaaaaacttcttgaactgacacca
ccaaaagggtcagagtttcttcacaaaattgagcatatattggaacgagaaaagaattgg
gtgtggtggaaacgtgatggctgcctcccatatgaaaagcaacctatagagaagaaagca
gtaccggagggatccaagaagcgtaggccaagatggagactgggtaataaagaactatct
cagttgtggaaatgggcagatcaaaatccaaatgctttaactgatcctcaacgtgttcaa
acaccttcaattatggagtactggaaacccttggctgatgatatggacccctctgctgga
atagaagctgaatatcatcacaagaataacagggtttattgttggaaaggtcttcggctt
gcagcacgacaagacttggaggggttttctaagtttactgatcatggcattgaaggggtt
gtcccactagagcttttgccacctgatgttcgatctaagtaccaagctaaaccaaatgac
agaagtaaacgtagcaaaaaggaagaaacaaaaggctctgcgcatcaagttgaggaaaat
cagattgccacaactgctactgagttggatggggatggcattcgaacagataccacagca
acacctatggaatttgatggtgccagtgtccctggtactcaaggtggaaccccaacacct
gaagaacttcataagcatagctcagacactgatgtaggacaggaagcaggccaattggaa
gcagaagccgaagtcgaggctggaatcatagatggcgagacagatgcagatgttgattta
gatactgttggctga
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