KEGG   Phaseolus vulgaris (common bean): 137834607
Entry
137834607         CDS       T03093                                 
Name
(RefSeq) THO complex subunit 1
  KO
K12878  THO complex subunit 1
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03013  Nucleocytoplasmic transport
pvu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    137834607
  09122 Translation
   03013 Nucleocytoplasmic transport
    137834607
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvu03019]
    137834607
   03041 Spliceosome [BR:pvu03041]
    137834607
Messenger RNA biogenesis [BR:pvu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     137834607
Spliceosome [BR:pvu03041]
 Complex C
  Other components
   EJC/TREX
    137834607
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    137834607
SSDB
Motif
Pfam: efThoc1 AcMNPV_Ac75
Other DBs
NCBI-GeneID: 137834607
NCBI-ProteinID: XP_068498774
LinkDB
Position
5:357245..369634
AA seq 604 aa
MEVFKRAILQPGPPENFALKTVQEVIKPQKQTKLAQDENQFLENILRMLLQEFVSAAVSA
EKIMQFGQSIDSNETTQGHIPRLLDIVLYLCEKEHIEGGMIFQLLEDLTEMSTMKNCKDV
FGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSER
SALNIKGVFNTSNETKFEKEPLEGICIDFNFYQTFWGLQEFFSNPTSISHAPVKWQKFTS
SLSVVLNTFEAQPLSDEEGDANNLEEEAVNFSIKYLTSSKLMGLELKDPSFRRHVLVQCL
ILFDYLKAPGKGDKDLPSENMKEEITSCEERVKKLLELTPPKGSEFLHKIEHILEREKNW
VWWKRDGCLPYEKQPIEKKAVPEGSKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRVQ
TPSIMEYWKPLADDMDPSAGIEAEYHHKNNRVYCWKGLRLAARQDLEGFSKFTDHGIEGV
VPLELLPPDVRSKYQAKPNDRSKRSKKEETKGSAHQVEENQIATTATELDGDGIRTDTTA
TPMEFDGASVPGTQGGTPTPEELHKHSSDTDVGQEAGQLEAEAEVEAGIIDGETDADVDL
DTVG
NT seq 1815 nt   +upstreamnt  +downstreamnt
atggaggtattcaaaagggccatactacaaccagggccacctgagaattttgctttgaag
acagtccaagaagtaataaagcctcagaaacaaacgaaattggcccaagatgagaaccaa
ttcctagaaaatatcttgcgcatgctgcttcaggagtttgtgtccgcggcagtatctgct
gagaaaataatgcaatttgggcaatccattgattctaacgaaactactcagggccacatt
cctcgccttcttgatattgtactatatctgtgtgagaaagaacacattgaaggtggaatg
atttttcagctgttggaagacttgacagaaatgtctacaatgaaaaactgcaaagatgtt
tttggctatatagagagtaaacaagatatattaggcaaacaagaactttttgctcgagga
aaactcgtgatgctgagaacctgcaatcaacttcttcgtcgtctatcaaaggcaaatgac
gtggtcttttgtggaagaattctcatgtttttagctcatttctttccgttatcggagcga
tcagctttaaatatcaaaggtgtttttaacacatcaaatgaaacaaaatttgagaaagaa
cccttggaaggcatatgcatagatttcaatttttatcagactttttggggtcttcaggaa
tttttttctaaccctacttccattagtcatgctccggtaaagtggcagaaattcacatct
agtttgtcggttgtattaaatacatttgaagcacaacctttgagtgatgaagaaggagat
gctaataatttggaggaagaggcagttaattttagtataaaatatcttacaagcagcaaa
ctaatgggtctagagttaaaggatccaagttttcgacgtcacgttcttgtacagtgtctt
atattgtttgattacttgaaggcccctggaaaaggtgacaaggatttgccatctgaaaac
atgaaagaagagatcacatcatgcgaggaacgggttaaaaaacttcttgaactgacacca
ccaaaagggtcagagtttcttcacaaaattgagcatatattggaacgagaaaagaattgg
gtgtggtggaaacgtgatggctgcctcccatatgaaaagcaacctatagagaagaaagca
gtaccggagggatccaagaagcgtaggccaagatggagactgggtaataaagaactatct
cagttgtggaaatgggcagatcaaaatccaaatgctttaactgatcctcaacgtgttcaa
acaccttcaattatggagtactggaaacccttggctgatgatatggacccctctgctgga
atagaagctgaatatcatcacaagaataacagggtttattgttggaaaggtcttcggctt
gcagcacgacaagacttggaggggttttctaagtttactgatcatggcattgaaggggtt
gtcccactagagcttttgccacctgatgttcgatctaagtaccaagctaaaccaaatgac
agaagtaaacgtagcaaaaaggaagaaacaaaaggctctgcgcatcaagttgaggaaaat
cagattgccacaactgctactgagttggatggggatggcattcgaacagataccacagca
acacctatggaatttgatggtgccagtgtccctggtactcaaggtggaaccccaacacct
gaagaacttcataagcatagctcagacactgatgtaggacaggaagcaggccaattggaa
gcagaagccgaagtcgaggctggaatcatagatggcgagacagatgcagatgttgattta
gatactgttggctga

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