Phaseolus vulgaris (common bean): 137834730
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Entry
137834730 CDS
T03093
Name
(RefSeq) DNA polymerase delta catalytic subunit-like isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03030
DNA replication
pvu03410
Base excision repair
pvu03420
Nucleotide excision repair
pvu03430
Mismatch repair
pvu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137834730
03410 Base excision repair
137834730
03420 Nucleotide excision repair
137834730
03430 Mismatch repair
137834730
03440 Homologous recombination
137834730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvu03032
]
137834730
03400 DNA repair and recombination proteins [BR:
pvu03400
]
137834730
Enzymes [BR:
pvu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
137834730
DNA replication proteins [BR:
pvu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
137834730
DNA repair and recombination proteins [BR:
pvu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
137834730
MMR (mismatch excision repair)
DNA polymerase delta complex
137834730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
REV3_N
Motif
Other DBs
NCBI-GeneID:
137834730
NCBI-ProteinID:
XP_068498991
LinkDB
All DBs
Position
5:complement(1649321..1665968)
Genome browser
AA seq
1088 aa
AA seq
DB search
MSNNPSRKRAAAPLQPPPAKQVLMIQEEEFMDEDVFTEQTLGDIDQTLCDIEQRQTLAAR
LSKWERPPLSADYVAHSRSVVFQQLEIDDVIGESHRELLPNLFGPAAIVRIFGVTKEGHS
VFCNVHGFEPYFYICCPPGMGPDDISHLHQTLEGRMRQANRNSNVGKFIRRIEMVQRRSI
MYYQQSDSQPFLKVVVALPTMVASCRGILDSGIKLDGLGMKSFLTYESNVLFALRFMIDC
NIVGGNWIEIPAGKYKKIAKSLSYCQLEFDCLYSDLISHAPEGEYSKMAPFRILSFDIEC
AGRKGHFPEPSHDPVIQIANLVTLQGEDQPLIRNVMTLKSCSPIVGVDVMSFDTEREVLL
AWRDLILEVDPDIIIGYNICKFDLPYLIERAKNLKIAEFQILGRIRNSRVWVKDTTFSSR
QYGTRESKEVTVEGRVQFDLLQVMQRDYKLSSYSLNSVSAHFLSEQKEDVHHSIISDLQN
GTAETRRRLAVYCLKDAYLPQRLLDKLMLIYNYVEMARVTGVPISFLLSRGQSIKVLSQL
LRKARQKNLVIPNVKQVGSEQGTFEGATVLEAKAGFYEKPIATLDFASLYPSIMMAYNLC
YCTLVTSEDARKLNIPPESVTRTPSGETFVKSNLQKGILPEILEELLTARKKAKADLREA
NDPLKRAVLDGRQLALKISANSVYGFTGATIGQLPCLEISSSVTSYGRQMIEHTKKLVED
KFRTLNGYKHDAEVIYGDTDSVMVQFGVSDAKEGVSAVEQAMNLGREAAEYISETFTKPI
KLEFEKVYYPYLLISKKKYAGLLWTKPDNFDKMDTKGIETVRRDNCLLVKNLVNDCLHKI
LIDRDTKGAVQYVKNTISDLLMNRIDLSLLVITKGLTKTRDEYKVMAAHVELAERMHKRD
AATSPNVGDRVPYVIIKAPEGAKAYEKSEDPIYVLENNIPIDTKYYLENQISKPILRIFE
PIIRNASRELFHGDHTRSISISTRSNNSTLKFPKQLTCIGCKAVLGKDHHTVCSDCKGRE
NELYCKTVSQVSELEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQNDMSEAK
SQLDRWSF
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaacccctcccgaaagcgtgcggcggcgccgttgcaacctccgccggcgaag
caagtcttaatgattcaggaagaggagttcatggacgaagacgtgtttacggagcaaacc
ctcggcgacatcgatcaaactctctgcgacatcgagcagcgccagactctcgctgctcgc
ctatccaagtgggagcgtcctcctctctccgccgattacgtcgcacactctcgtagcgtc
gtttttcagcagctggagattgatgatgtgatcggggagagtcacagagagttgctgccc
aacttgtttggacctgctgccattgtcagaatctttggagttacgaaggaaggacacagt
gttttctgcaatgttcatgggtttgaaccatatttctacatctgttgccctcctggaatg
ggtccagatgatatctctcatcttcaccaaacacttgagggaaggatgagacaagccaat
agaaatagtaacgtaggaaaattcattcgccgcattgaaatggtgcagaggagaagtatt
atgtactatcagcaatctgattcccagccctttctcaaagttgtagttgcacttccaaca
atggttgccagctgccgtggtattcttgatagcggtattaagctcgatggtctgggaatg
aagagcttcttgacttatgaaagcaatgtactttttgccctgcggttcatgattgattgc
aacatagtaggtggaaattggattgaaattccagcaggaaaatataagaagatagcgaaa
agcttgtcttattgccagttggagtttgattgcctgtattctgatttgattagtcatgct
ccagaaggggaatattcaaagatggctccatttcgtatattgagttttgacattgagtgt
gctggtcgtaaaggtcattttcctgagcctagccatgatcctgttatccagattgctaat
ttggttactttacaaggagaagaccagccacttattcgcaatgtgatgacccttaaatca
tgctctcctattgttggtgttgatgtgatgtcatttgatacggaaagagaagtcctgcta
gcttggagggatttaattctggaagtggaccctgatattattattggatataacatctgc
aaatttgacctgccatatcttattgagagagccaaaaacctgaagatagcagaatttcaa
attcttggccgtattaggaacagtagagtttgggtaaaggatacaactttctcgtcaagg
cagtacgggaccagggaaagcaaagaagttacagtagaagggagagttcagtttgactta
ctccaggttatgcagagagactacaaattaagttcttattcactaaattctgtctcagca
cacttcctttctgagcagaaagaggatgtccaccattctatcatatctgatctccagaat
ggaaccgcagaaacaaggaggcgccttgctgtgtattgtttgaaggatgcatatctccct
cagcggcttttggataaattgatgttgatttacaactatgtggaaatggctcgagttaca
ggtgttccaatttcctttctactttccagaggccaaagcattaaggtactttcacaactt
cttaggaaggcaagacagaagaatctggtcattcctaatgtcaaacaggttgggtctgaa
caaggaacatttgaaggtgccacagtattggaggcaaaggctggattttatgaaaaacca
attgctacgttagattttgcatccctgtatccatctattatgatggcctataatttatgt
tattgcactctggtgacttctgaagatgctcgcaagcttaacatccctccagaatccgtg
accagaactccatctggtgaaacatttgttaaatcaaatctgcaaaagggaatacttcct
gaaatacttgaagagctattaacagcccgaaaaaaggcaaaagcagacttaagggaggca
aatgatcccctgaagagggcagtgctagatggtaggcagctggccctgaaaattagtgca
aattctgtgtatggatttactggggctaccattggtcagttaccatgtttggagatatca
tcgagtgtaacaagctatggtcgacagatgattgagcacacaaaaaaacttgtggaagat
aaatttagaacacttaatggctataaacacgatgctgaggtaatatatggagacacagat
tcagtcatggtacaatttggtgtttctgatgcaaaagagggtgtttctgctgtagaacag
gctatgaacttggggagagaagctgccgaatatataagtgaaactttcacaaaacccatc
aaactagaatttgagaaggtttattatccatatctattgattagcaagaagaaatatgct
ggtttgctttggacaaaaccagacaactttgacaaaatggacactaaaggtattgaaaca
gttcgaagagacaattgtttgttggtaaaaaacctggtgaatgattgtcttcacaaaata
ctgattgatagggacacaaagggggctgtccagtatgtcaagaacacaatttcagatctt
ctcatgaatcgaatagatttatctctgctggttattacaaagggtttaacaaagacacga
gatgagtacaaagtaatggcagctcatgttgaacttgctgaaaggatgcacaagcgagat
gctgccacttctccaaatgttggagatagagtaccttatgtaattatcaaagctccagaa
ggtgcaaaggcgtatgagaaatcagaggaccctatttatgttctagaaaacaacatacct
atagatactaaatactatcttgagaaccaaattagcaagccgattctgagaatttttgag
ccaattatccggaatgctagcagagaacttttccatggagatcatacaagatctatttca
atttctactcgatcaaacaatagcacattgaaatttcctaaacagcttacctgcattggc
tgtaaagctgtactaggcaaggatcatcacactgtctgttcagattgcaaaggaagggaa
aatgagctatactgtaaaacagtatctcaagtgtctgagctggagatgctttttgggagg
ttgtggacacagtgtcaggagtgccaaggttcacttcatcaagatgttctctgcacaagt
cgggattgtccaattttttatcgacgaaaaaaggcacagaatgatatgtccgaagcaaaa
tcgcaattggaccggtggagcttttaa
DBGET
integrated database retrieval system
