Phaseolus vulgaris (common bean): 137834743 Help Entry 137834743         CDS       T03093                                  Name (RefSeq) DNA ligase 1-like isoform X1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism pvu  Phaseolus vulgaris (common bean) Pathway pvu03030   DNA replication pvu03410   Base excision repair pvu03420   Nucleotide excision repair pvu03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pvu00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     137834743    03410 Base excision repair     137834743    03420 Nucleotide excision repair     137834743    03430 Mismatch repair     137834743  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pvu03032]     137834743    03400 DNA repair and recombination proteins [BR:pvu03400]     137834743 Enzymes [BR:pvu01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      137834743     6.5.1.6  DNA ligase (ATP or NAD+)      137834743     6.5.1.7  DNA ligase (ATP, ADP or GTP)      137834743 DNA replication proteins [BR:pvu03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     137834743  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      137834743 DNA repair and recombination proteins [BR:pvu03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      137834743    NER (nucleotide excision repair)     Other NER factors      137834743    MMR (mismatch excision repair)     Other MMR factors      137834743 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Motif Other DBs NCBI-GeneID:  137834743 NCBI-ProteinID:  XP_068499011 LinkDB All DBs Position 5:complement(1832302..1840588) Genome browser AA seq 795 aa AA seqDB search MSKPPSALDFLMSVAAAAAAVKKNSQSKPQTPKLSSSLKKRKSPNSTSVAKKRKSPHSTS SQNPSINKFLNLPSPQAVKPEQVLKPKEVLKPEEVLKAEEAVKAEEVVEMEKQVQQLRQK PSSFDPASVTAWEKGQPVPFLFLALAFDMIDEETSKTVITDIACNMLRTVMVVTPEDLVP IVYLSASRIAPPHEGLELGIGDSIIIKTFAEAYGKEEELIRTQYQKKGDLGLLVKESRSS QSTISQYYKPQKPPEALTIRKVFNTFRLIAKESGKDSQEIKKNHIKALLVAATECEPQYL IRLLQAKLRIGYAEQTLLAALGQAAVYSEEHSRPPPHFLSYYIYIYMCVCVCVCVCVCVC VCKYIFISGFILHQASDIVKQVYSVLPDYDKIISALLREGLWMLPKKFLKFTPGVPIRPM LPKAVKTVPEILKKFQGVEFTCEYKYDGERAQIHYLENGKVEIYSRQEERNTEKFPDVIE AVSRLKKESVSSFILDCEIVAYDRATRKLLSFQTLATRPRKKVETEDIKVNVCVFGFDLL YLNGQELLQKNLRVRREHLYASFDEESGSLQFAKALTSNDVEELQNFLYQAVGASCEGLV IKTLNEDATYEPAKRSLGWLKLKKDYMENLGDSVDLVPIGAFHGHGRRTVTCLVGVYGAF LLACYDNNNEEFQSICKIGTGFADSDLVERSSSLRSKVISRPKSYYRFGETMNPDVWFEA SEVWEVRAAELTISPVHRAAAGIVDPNKGISLRFPRLIRLRHDKAPEQATSAEQVAELYK AQANNQANEQDEEDY NT seq 2388 nt NT seq  +upstreamnt  +downstreamnt atgtccaagccaccctccgccttggactttctaatgtccgtcgccgccgccgccgccgcc gtcaagaagaattcccagtccaaaccccaaacacccaaactttcatcatccctcaagaaa agaaaatccccaaactccacttccgtcgccaagaaaagaaaatccccacactccacttcc tcacaaaaccctagcatcaacaaattcctcaatctgccttctccgcaagctgttaaaccg gaacaggttcttaaaccgaaagaagttcttaaaccggaagaagttcttaaagcagaagaa gcggttaaagcagaagaagtcgtggagatggagaagcaagtgcagcagttgaggcagaaa ccctcgagtttcgatcccgcttcggtgactgcatgggagaagggacagccagtgccgttt ctctttctcgccttggcatttgatatgattgatgaggaaaccagcaaaactgttataact gacattgcttgcaatatgctgcggactgttatggtcgtcacgccggaggatcttgttccc atcgtttacctctccgccagccggattgcgcctcctcatgaagggttggagttgggaatc ggcgactcgatcattatcaagacattcgcggaggcctatggaaaggaggaggagttaatt aggactcagtatcagaaaaagggggatttgggcttgcttgttaaagagagccgttcgtct caatctaccatttctcaatattataagccgcagaagcctcctgaagcattgaccattagg aaggttttcaacacttttcgccttattgctaaggaatctggaaaagacagtcaagaaata aaaaagaaccatatcaaggcacttcttgttgctgcaactgagtgtgaacctcaatatcta attcgtttgcttcaggcgaagttgcgaattggttatgcagagcaaactctattggctgca ttaggccaagctgcagtatacagtgaagaacactctagaccacctcctcattttctttcc tattatatatatatatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt gtgtgtaagtatatatttatttctggtttcattttgcatcaggcttcggatattgttaaa caagtctattctgttcttcctgactatgacaaaataatatctgcactgcttagagagggt ctatggatgcttccaaagaaatttttaaaatttacccctggtgttccaattagacctatg ctgccaaaggcagtaaaaactgtacctgaaattctaaaaaaattccagggtgtggagttt acctgtgaatacaaatatgacggagagcgtgcccagatacattatctggagaatggtaaa gttgagatttacagtagacaagaagaacggaacactgagaagtttcctgatgttattgag gcagtttcaaggttaaagaaagaaagtgtatcttcatttattcttgattgtgaaattgtt gcatatgaccgcgcaacacggaagcttctttctttccagactcttgctactcgacctcgc aagaaagtagaaactgaagatataaaggttaatgtttgcgtatttggtttcgatttgttg tatctaaatggccaagaacttcttcagaaaaacctcagagtccgtagagagcatctttat gcctcttttgatgaagaatctggatctcttcagtttgcaaaagcattaacttcaaatgat gttgaggagttacaaaattttctttaccaagctgttggtgctagttgtgagggattagtc attaagacattaaatgaggatgctacatatgaacctgccaagcgatcactcgggtggcta aaactgaagaaagattatatggagaatttaggggactctgtagatttggtacctattggt gctttccacggacatggaagacgtacagtgacatgtcttgtaggagtttatggcgccttc ctcctggcttgctatgacaacaataatgaagaatttcaaagtatttgcaagattggaacg ggatttgcagattctgatcttgtagaacgttcttccagtcttcgttctaaagtgatttcc aggccaaagtcatactatagatttggagaaacaatgaatcctgatgtgtggtttgaagcc agtgaggtgtgggaagtgagagcggcagagctgaccattagccctgtccaccgtgctgca gcgggcatagttgatcccaacaagggcatatctcttcgatttccacgactaattcgactc cggcatgacaaagctcctgaacaggccacatcagctgagcaggttgctgagttgtataaa gctcaagccaacaatcaagccaacgaacaagatgaagaagattattga

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