Phaseolus vulgaris (common bean): 137834956
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Entry
137834956 CDS
T03093
Name
(RefSeq) nuclear-pore anchor isoform X1
KO
K09291
nucleoprotein TPR
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137834956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
137834956
Messenger RNA biogenesis [BR:
pvu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137834956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
137834956
NCBI-ProteinID:
XP_068499325
LinkDB
All DBs
Position
5:complement(4912757..4943631)
Genome browser
AA seq
2084 aa
AA seq
DB search
MPLFLSDEEFSRCSGDGAAVAAKADAFIRGLLHELDTVRAKADAADINAEQNCSLIEQKY
LSLAAEFSKLESNVADLQSSLDQRLRELAETQSQNHQIQLQSVEKNREIERLRMEVGELH
KSKRQLIELNEQKDLELSEKNATMKSYLDKIVHLSENAAHKEARLSEVEAELARCRAACS
RLEQEKEIIEKQNSWLNEELNGKVNSVFELRRKNADLEADISSKLADMERQFNQCSQSLQ
WNKDRVRELEMKLKSVQEELISAKDAAAVNEEQLSAELSTVNKLNELYKESSKELSKKTT
DLEGVIKALESDLKQVEDHYKGKLEKELSARKQVEKEVTDLKEKLEKCEAESEARKKTNE
LNNLPLSSFTTESWIESIEADSMVEENSLVVPKIPVGVSGTALAASLLRDGWSLAKMYSK
YQEAVDALRHEQLGRKESEAVLQRVLYELEEKAEAIIDEREEHEKMADAYSSMSQKLQNS
LNENSNYEKTIQELKADLKRHERDYNLVLKETDDLRKQVTVLLKECRDIQLRCGSMGYDN
VDDSSNIASRTSTETEAEHVISEHLLTFKDINGLVEQNVQLRSLVRSLSGQIENQEVEFK
EKLEMELKKHTEEAASKVAAVLQRAEEQGQMIEALHASVSMYKRLYEEEHNLHLSQSHSS
ETRAAFAEVGRNTLKTSIESSQEAAKKSLEKSAERVRCLEDDLAKSRSKIILLQSEREKM
ALEANFSRERLDSFMKEFEHQKAEAKAILERNIEFSQLVVDYQRKLRESSESLIAAEELA
RKLTMEMSVLKQEKEIISNAEKRASDEVRSLSERVQRLQASLGTIQSTEEVREEARAAER
VKQEEYIRKLEKEWAEAKQELNEERESVRRFTLDRDQTIKNSLRQVEDMNKELANALRAV
ASAESRAAVAEAKLSSLQRKLGSTDDKLVSMGGESGPSTLSSDEVVTELEKAKEEIEKFK
EEAHANKVHMLQYKSIAEVNEDALKQIEMAHEKFKTEAEDSKKVLESELNSLREKMLEIE
NESSLKYEEVASETVGKEEALTSAMAEITNLKEEILTKSSQISALEIQLSGLKENLDMEH
QKWRAAQTNYERQVVLQSETIQELTKTSEALSLLQEEASELRKLTNTQKVENNELKARWE
EDKAQLEKSRNDAEKKYNEINEQNKILHSQLEAFHIRWAEKERNAAGISSGSSTADAFGD
GGLQNVINYLRRSKEIAETEVSLLKQEKLRLQSQLESALKAAESAHATLESERAKSKSFL
FSEEEFKSLQLQVREMNLLRESNMQLREENKHNFEECQKLREVAQKARTETDNLENVLRE
REIELEGCKKEIETLKLEKDNLNNKVLELLERSKHVDVEDYDRVKKLARELQDKLRDRDA
RIEEMSKSLSEKQDSISRLEKDLANCRMELVEREKRINDILHNEANLKVDSEKHRKLLAQ
FKKRIDILLREKEDIGKENQQLSRQLDEIKQGKRSTSDTTGEQAMKEEKDTRIQILEKHL
ERLRDELKKEKEESRLERGRRLKTEKAIKDSYNNVEQEKTKFVNQIEKHKESLKKLSDEV
EKLKIVIGNLPEGLNVVQLLSGSNVDDFAASYISAVESFEKEAHSIFRELGGRGNLGDAA
TITDGSTAATGSLVQVQSQSIPSLAVPGASSLPPKATGESEKRLALTLPKASVETRRTGR
KLVRPRLVRPDEPQGDTEMSDAEGPVGKPGPSSDTETSNFAQSSQPLARKRVAPTSNSEL
REESVASGEKSSDVVAPALKKSKGSESPEESTEEQPAANLEFTGSQPASEELFDSSELPQ
GQNEEGEAQNEDGEIAVGNDEESKDPQHLDGTSQEELQGDKTGILEENPDQPDEMQRDHT
DPDNQHSTLATSGEREEGELLPDAGDIEGGSDLSNIVENQESREGQSESAATPERSPARG
DDDALEAGEINSPELSSDDKNDEIDLVEEAADGSDKLIDVNEPISVESDQVADPTPVVSD
GATLTSSVTESSSSKVNLPVPRQGTPSAPAPSETEETTKQASPIGSTSTTINLSERARER
AQMRQAGLVSTPNVTRGRGRGAPRGRARGRTVVRRPPPSSGGDP
NT seq
6255 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcttcctctccgatgaggagttctcgcggtgctccggtgacggcgccgccgtg
gccgcgaaggccgacgcttttatccgcggcctcctacacgagctcgacaccgtccgtgcc
aaggccgacgccgctgacatcaacgccgagcagaactgttccctcatcgagcagaaatac
ctttccctcgccgccgagttctccaagttggagtccaacgtcgctgacctccaatcttcc
cttgatcagcgcctccgcgaactcgccgagacgcaatcgcagaaccaccaaattcaattg
caatcggttgagaaaaatagggagatagagcggttgaggatggaggtgggggagttgcac
aagtcaaagaggcagttgattgagttgaacgagcagaaggatttggagcttagtgagaag
aatgcaaccatgaagagttatcttgataagattgtccatttaagtgaaaatgctgctcat
aaggaggctcgattgagtgaagttgaggcagaattagcgcggtgccgggctgcttgcagt
cgccttgaacaggagaaggagattattgagaaacagaattcttggctgaacgaggagttg
aatggtaaagttaacagtgtttttgagctacgcagaaagaacgcagatttggaagctgat
atatcttccaagcttgcagatatggagagacaattcaaccaatgttctcaatctctacag
tggaataaggatagagtgagggagcttgaaatgaagcttaaatctgtgcaagaggaatta
atttcagctaaagatgctgcagcagtcaatgaagaacaattatctgctgaactctccact
gttaataagcttaatgagctatataaagagagttccaaggaattgtcaaaaaagacaaca
gacctagagggtgtgataaaagcgttggagtcagacttaaagcaagttgaggatcattat
aaagggaaacttgagaaggaattatctgccagaaaacaggttgaaaaggaggtcactgat
ttaaaagaaaagcttgagaagtgtgaagctgaaagtgaggcaaggaagaagacaaatgaa
ctgaacaatcttcctcttagcagtttcactactgaatcgtggattgaatcaattgaagcc
gatagcatggtggaggaaaatagtttagtagttccaaaaattcctgttggagtttctgga
actgcattggctgcttcacttcttcgagatggctggagtttagccaaaatgtattcaaaa
taccaagaggcggttgatgcattgaggcatgaacaattgggaaggaaggagtcagaggca
gtactccaacgggttctctatgagttagaggagaaagcagaagcaattattgatgaaaga
gaggaacatgaaaagatggctgatgcatactcctcgatgagccaaaagttgcaaaactcc
ctgaatgaaaattccaactatgagaaaaccattcaggaactgaaggctgatctaaaaagg
catgaacgtgattataatcttgtcctgaaagaaactgacgaccttcggaaacaggtgaca
gtacttttaaaggaatgtcgagacattcaacttcgttgtggctcaatggggtatgataat
gtggatgattcttcaaatattgcttcaaggacaagtacagagactgaagctgagcatgtc
atatcagagcacctcttgacttttaaggacattaatggactagttgagcagaatgtccaa
cttagaagccttgtacgtagtctttctggccagattgaaaatcaggaggtggaattcaag
gagaagcttgaaatggaactcaaaaaacatactgaagaagctgcttctaaagttgcagct
gttctgcagagagcagaggagcaagggcaaatgattgaggcgcttcatgcatctgtctcc
atgtacaaaaggttgtatgaggaggagcataatcttcatttatctcaaagccattcttca
gaaacacgtgcagcttttgcagaagttggaagaaacaccctcaagacttcaattgaaagt
tctcaggaggctgcaaagaagtccttggaaaaatctgctgagcgtgtgagatgccttgag
gatgatttagcaaagtcaaggagtaagattattttattacaatcagaacgtgaaaagatg
gcacttgaagcgaatttttctagagaaagacttgatagctttatgaaagaatttgagcat
cagaaagctgaagcaaaagccattttagaaagaaacatagagttttctcagctggttgtt
gactaccaacgaaagttgcgtgaaagctctgagtcattgattgctgctgaggagcttgcc
aggaaacttactatggagatgtcagttttaaaacaagaaaaggaaataatatcaaatgct
gaaaaaagagcttctgatgaggttcgcagcttgtctgaaagagtgcagcgtctgcaggct
agtttgggtaccatacaaagtaccgaggaagttcgagaggaagcaagggctgcagagagg
gttaagcaagaagaatatataaggaaattggagaaggaatgggctgaagccaagcaagag
ctaaatgaagagcgagaaagtgtgcggagattcacactagatcgggaccagaccataaaa
aattctctgagacaggttgaggatatgaacaaagagttagctaatgcattgcgtgcagtt
gcatctgctgaatcgagggctgctgttgctgaggcaaaactctccagtctgcaaagaaaa
ctgggttccacagatgacaagcttgtctcaatgggtggagagagtggaccttccactttg
tcaagtgatgaggttgttactgaattggaaaaggcaaaggaggaaatagaaaagtttaaa
gaggaagcacatgccaacaaagttcacatgcttcagtataagagcattgcggaggtgaat
gaagatgcattgaaacagatagaaatggcacatgagaagtttaaaacagaggctgaagat
tcaaagaaagttctagaatctgaacttaattcacttagagagaagatgttagagattgaa
aatgaatctagtttgaagtatgaagaagttgcttctgaaactgtgggaaaggaagaggct
cttacatctgctatggctgaaatcacaaatcttaaagaagaaattttaaccaaatcttct
caaatttcagcattggaaattcagctatcgggtttaaaggaaaacctggacatggagcat
cagaagtggcgggctgctcaaactaattatgaaagacaggttgttctccagtctgaaacg
attcaggagttgactaaaacatctgaagcactatccttgctgcaggaggaggcatctgaa
ttacggaaactaaccaatactcagaaagttgaaaataatgaactgaaggctaggtgggaa
gaggacaaggcacaattagagaagtctaggaatgatgctgaaaagaaatacaatgaaatc
aatgaacagaataaaatattacacagtcaacttgaggcttttcatattcggtgggctgag
aaggagcgtaatgctgctggtatttcatctggaagtagtactgcagatgcctttggtgac
ggtggccttcaaaatgtcattaattatctcagacgatcaaaagaaatagcagaaacagaa
gtttcattgttaaaacaagagaagctgcggttacagtcacagcttgagagtgccttgaag
gcagcggagtctgcacatgcaacactagaatctgagcgtgcaaaatcaaaatcatttttg
ttttccgaagaagagttcaaatcgctgcagcttcaggtcagagaaatgaacttacttcgt
gagagtaacatgcagctaagggaagaaaataaacacaattttgaggagtgtcagaaattg
cgcgaagtagcacaaaaggctagaaccgagacagataaccttgagaatgtccttagggaa
agagaaattgagcttgaaggctgtaaaaaggaaattgaaacgctaaaattggaaaaagat
aatctcaataacaaggttttggagttgcttgaaaggagtaaacatgttgatgttgaggat
tatgatcgagtgaagaaacttgctagagaacttcaggataaactaagagatagggatgct
cggattgaggaaatgagtaaaagtctatcagagaagcaggattctatttcacgtctagag
aaagatcttgcaaactgccgaatggagcttgtagagagagaaaagagaattaatgacatt
ctgcataatgaggctaacctaaaagttgattcggagaagcataggaaactgctggctcag
tttaagaagaggattgatattttgttaagggaaaaggaagacataggtaaagagaaccag
caactttctaggcaactagatgaaattaaacaagggaaaaggtcaacttctgatacaact
ggtgaacaagcgatgaaggaagaaaaggacacaagaatacagattctggagaaacatctg
gagagacttagagatgaattaaagaaggagaaggaagaaagtcgcctagagagaggaaga
cgactaaagactgaaaaggccataaaggactcttacaacaatgttgagcaggagaaaaca
aaatttgtcaatcaaattgagaagcacaaggagtctctgaaaaagttatctgatgaggtc
gaaaagcttaagatagttattggcaatcttcccgagggtttgaatgtggttcaacttcta
tctggatccaatgttgacgactttgctgcttcttacatatctgctgttgaaagttttgaa
aaggaagctcattcaatatttcgtgagcttggaggtcgcggtaatcttggagatgcagct
acaattacagatggttcaacagctgctacaggttctcttgtccaagttcaatcccaaagc
atcccatctctggctgttcctggagctagcagtttaccacctaaagccactggagaaagt
gagaaaagacttgcattaacattacccaaagctagtgttgagactcgtcgaacaggtaga
aaattggtcaggcctagactcgtaagacctgatgagccacaaggtgacacagaaatgtct
gatgccgaaggaccagtgggcaagcctgggccgtctagtgacacagaaacaagtaatttt
gctcaatcatctcaaccattggctcgtaaacgtgttgctcctacgtccaattctgaatta
cgtgaagaatcagttgcatctggagagaagagctctgatgtagttgcacctgcgttgaag
aagtcaaaagggtcggagtccccagaagagagtacagaagaacaacctgctgctaatctg
gaatttactggcagtcaaccagcaagtgaagaattatttgatagcagtgagttgccacaa
ggccaaaatgaggaaggtgaagcccaaaatgaagatggtgaaattgctgttgggaatgac
gaggaatccaaagaccctcaacacttagatggtacaagtcaagaggaattacaaggggac
aaaactggaattttagaagagaatccggatcaacctgatgagatgcagagggatcacact
gacccagacaaccagcactcaacattggcaaccagtggtgagagagaagagggagaattg
ttgccagatgctggagatattgagggtggtagtgatttgtctaatattgtcgaaaatcaa
gaatctcgggaaggtcaatctgagtctgctgcaacccctgaacgttccccagcacgaggg
gatgatgatgctctagaggctggtgagattaactctcctgagctttcaagcgatgataag
aatgatgagattgacttggttgaggaggctgctgatggttctgacaagttaattgatgtt
aatgagccaatatcagttgagagtgatcaggtagctgacccgacacctgttgtgagtgat
ggtgctactttgacaagtagtgttacagaaagtagttcctctaaggtgaacttacctgtt
ccaaggcaaggaacccccagtgcccccgccccctccgaaacagaagagacaacaaagcag
gcatcacctattggtagtacctcaactaccataaatttgtcagagcgagcacgagaaagg
gctcaaatgagacaagctggtttggtttctacccctaatgttactagaggtcgtggaaga
ggtgctccccgagggcgggctcgcggtcggacagtagtacgccgacctcctccatcatcc
ggtggtgacccatga
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integrated database retrieval system