Phaseolus vulgaris (common bean): 137835050 Help Entry 137835050         CDS       T03093                                  Name (RefSeq) protein PAT1 homolog isoform X1   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism pvu  Phaseolus vulgaris (common bean) Pathway pvu03018   RNA degradation Brite KEGG Orthology (KO) [BR:pvu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     137835050  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pvu03019]     137835050 Messenger RNA biogenesis [BR:pvu03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      137835050   mRNA degradation factors    5'-3' decay     Decapping complex      137835050 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  137835050 NCBI-ProteinID:  XP_068499485 LinkDB All DBs Position 5:complement(7532790..7544444) Genome browser AA seq 880 aa AA seqDB search MVDMDGFGAGGGVDGAPITQNLRELGNVTSEGAVFDASQYAFFGKEVELGGLEDNDRLPT LDSNEEEFFFNGEDAEDVRSLSDIDDLTTTFLKLNKFVSGPRSAGVIGERGSRENSTSEW SQREDSVNWFDQNPYDGEGSTDGKRWSSQPHSSLAHLQDSKPLYRTSSYPEQQRQEQHYH LQHCSSEPVPNWLDQHIYDTETAHDHDGKRWSSQPHSSIPHLPDSKPLYRTSSYPDKQQE LPRFSSEPILVPKSSFTSYPPPGGLSQMASPSHSTGHLNIPYHTGAAQMALSSQNRSHFS NSALQSGALNLGSHFGGNTRQFPTGSHLNQRLQNQLVNQAGFYPGDHSNLLNNMLQQQLH LHNGSVSPHLMTQLQQQHRLHHPVQRSAGYLSGYQSHLFNPHLSSGSSVISKYEHVLGLA DGRDHRPKSTHKGKHSLRYSQHGSDASQKSDSASFQFRSKYMTSDEIESILRMQHAVTHS NDPYVDDYYHQACLAKKPSVAKLKHPFCPTQIREIPPRTRANAEPHAFVQVDALGRVSFS SIRCPRPLLEVDPPNTSISSDQNVSEKPLEQEPRFAARVTIEDGLCLLLDVDDIDRYLQF NQPQDGGTQLRRRRLVLLEGLATSLQLVDPLGKNGHKVGLAAKDDLVFLRLVSIPKGRKL LAKYLQLLPPGSELMRIVCMTVFRHLRFLFGGLPSDLSASETTNNLAKVVCQCVRGMDLG ALSACLAAVVCSAEQPPLRPIGSTSGDGASLILISVLERATELLTDPHAACNYNMGNRSF WQASFDEFFGLLTKYCMNKYHSIMQSMLIQSTSNVDDVGPDAAKAISREMPVELLRASLP HTDERQRKLLLDFAQHSIPVVGFNNTGGNGGHVNSETVLS NT seq 2643 nt NT seq  +upstreamnt  +downstreamnt atggtggatatggatgggtttggagctgggggtggcgttgatggcgctcccatcacacag aatcttagagaattggggaatgttacctcagaaggtgcagtttttgatgcatcgcaatat gcattcttcggtaaagaagtcgagttgggagggttagaagataatgaccgtttgcctact cttgattctaacgaagaggagttctttttcaatggagaagatgctgaggatgtgagatct ctttctgatattgatgatcttactaccacttttttgaagttgaacaagttcgtgagtgga ccaagaagtgcaggagttattggcgaacgaggatcaagagaaaattctacatctgaatgg tcacaaagagaagatagtgttaactggtttgatcagaatccttatgatggtgaaggttct acagatggcaaaagatggtcatcacagccccattcttccctagcccatttgcaggattca aagcccttgtacagaacatcttcatatcccgagcagcaaaggcaagaacaacactaccac ctccaacattgctctagtgaaccagttcctaactggcttgatcagcacatttatgataca gaaactgctcatgatcatgatggtaaacgatggtcatcacagccgcattcctccattcca catttaccagactcaaagcctttgtacagaacatcttcatatcctgacaagcaacaggag cttcctcgtttttctagtgaaccaattttggtaccaaagtcttcttttacttcttatcct ccccctggtggtctatcccagatggcttctcccagccatagtacaggacacttgaacatt ccttatcatactggagcagctcagatggcgttgtcatctcaaaatcgttctcatttctcc aattctgcactacagtcaggtgctttaaatcttgggtcacattttggcggaaacacacgc caatttcctactggttcccatcttaatcagcgattacagaatcaattggttaaccaggca gggttttatcctggagatcattcaaatctccttaataatatgttacaacaacaattgcac cttcataacggatcagtatctcctcacttaatgactcaattacaacagcagcatagattg caccatcctgttcagcgttctgcaggctacttatcaggctaccagtctcatctattcaat ccccacctttcctctggctcatctgtaattagcaaatatgaacatgtgcttggtcttgct gatggtagagatcatagaccaaaatcaactcataaaggtaaacacagtcttcgttattcc caacatggttctgatgccagccaaaagagtgatagtgcttcttttcagttccggtccaag tacatgacaagtgatgaaattgaaagcattcttaggatgcagcatgctgtgactcatagt aatgacccatacgtagatgactactaccaccaagcttgtctggcaaaaaaaccttctgtg gccaagttaaaacatccattttgcccaacccagataagggaaattcctccacgaacccgt gctaatgctgagccacatgcatttgtgcaggttgatgccctagggagagtttcattttct tctattcgttgtcctcgccctctacttgaggttgatcctccaaacacttctataagctct gatcaaaatgtttcagagaagcccctagagcaggaacctaggtttgctgccagagtcaca attgaggatggtctttgtcttcttctagatgtggatgatattgatcggtacctacagttc aatcagccacaggatggtggaacacaattaagacgaagaaggctagtcctgttggaagga ctagcaacttcacttcaacttgttgacccacttggaaagaatggacacaaagttggactt gctgctaaggatgaccttgttttcttaaggttagtatctattcccaaggggcgtaagctc cttgcaaagtatcttcagttgcttcctcccggcagtgagcttatgaggatagtctgcatg acagtctttcgtcatttaagattcttatttggtggtctcccctcagatctgtcagcttca gagactacaaataatcttgccaaggttgtttgccaatgtgtgcgaggaatggatcttggt gctcttagtgcctgtcttgctgcagttgtttgttctgcagagcagcctcctctacgtccc attggaagcacctctggggatggtgcttcccttattttaatttctgttcttgagagggca actgaacttctaactgatccacatgctgcttgcaactacaacatgggtaatcgttcattt tggcaggcctcatttgatgaattctttggccttctcaccaagtattgcatgaataaatat catagtatcatgcaatccatgctcatacaaagtacctcgaatgtggatgatgttggtcca gatgctgccaaagctattagtagagaaatgcctgttgaactcttgcgtgctagtctccct cacaccgatgagcgccagaggaagttattactagattttgctcaacactccattcctgtg gttggatttaacaacactgggggtaatggaggtcatgtgaattcagaaacagtgttaagt tga

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