KEGG   Phaseolus vulgaris (common bean): 137835999
Entry
137835999         CDS       T03093                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
pvu  Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pvu03009]
    137835999
Ribosome biogenesis [BR:pvu03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    137835999
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz EIF3I WDR55 Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_EML NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_HPS5 ANAPC4_WD40 WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_IP5PC_F Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_SPT8 WDR54 Beta-prop_LRRK2 Beta-prop_DCAF12 Beta-prop_WDR75_2nd WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_VPS8 WD40_RFWD3 Beta-prop_BBS7 Beta-prop_WDR19_2nd GH101_dom-5 Vps54_N DUF4363
Other DBs
NCBI-GeneID: 137835999
NCBI-ProteinID: XP_068500892
LinkDB
Position
5:40001745..40016974
AA seq 448 aa
MEVVLASSSVDGGIGCWDLHTGAEQLRYKSCLSPSHGLISVGSRFIASSQLRETSATSGS
VLFWSWSKPQVEVKSFPAEPIKPLASNHPGTFVVGGASSGDIYFWEVETGRLLKKWRAHF
RAVTCLVFSEDDSLLISGSEDGTVRVWSLFMIFDEFRGQQANNLYEYSFSGHTLRVTDVV
IGNGGCNAIIVSASEDRTCKVWSLSRGTLLRNIVFPSVIDSIALDPAEHVFYAGSRDGKI
YIAALNTESVATNNCGMHIIGSFSNHSKTVTCLAYGMSENLLISGSEDGMVRVWNARTRN
IVRMFKHAKGPVNNILVVRRENSTNHISSNVQTSSRKQGANVPPPLEKYANSIDEDSDMS
TMVSLGGGSSSVVPLYISSSLISNYIKELQHQGSSAASEIETEKLKHDYQRSMQMTNQWN
KMYENLNKFCVQELMDGTQATTLDENHN
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggaggttgttttggcgtcgtcgtctgttgacggcggaatagggtgctgggacctccac
accggcgcggagcagctccgctacaaatcttgcttatccccttctcacggccttatctcc
gtcggttctcgcttcatcgcctcctctcagcttcgagaaacttcagcaacatctggttct
gttctcttctggtcctggtccaagcctcaagttgaagtgaagagctttcccgctgaacct
attaagccccttgcttctaatcacccgggaaccttcgttgttggtggagcttcgtctggt
gatatttacttctgggaagttgaaaccggtagattgcttaagaagtggcgtgcacatttt
agggcggttacttgtctggttttttctgaagatgactcgctgttgatatctggttctgaa
gatggaaccgtaagagtttggtctctcttcatgatattcgacgagttcagagggcagcag
gcaaataatctttatgagtatagtttttcaggacacaccctgcgcgtgactgatgttgtt
attggcaatggagggtgcaatgcaattattgtgtcagcttcagaggatcgaacttgcaag
gtatggagcttatctaggggaacactactaagaaatatagtattcccttcagttattgat
tcaattgcattggatccagctgagcacgtcttttatgctggcagtagagatggaaagata
tatattgctgcacttaacactgaaagcgttgctactaataattgtgggatgcatatcatt
ggttctttttctaaccacagcaagacagttacttgcttagcatatggcatgagtgagaat
ttgttaatatccgggtcagaggatggaatggttcgtgtttggaatgcaagaactcgtaac
attgtccgcatgttcaaacatgctaaagggcctgtaaataatattctggttgttagacga
gaaaactctactaatcatatatcttctaatgtacaaacatcatcaagaaagcaaggggct
aatgtgccccctccattggaaaaatatgcaaattcaatagatgaagactcggatatgagc
actatggtgagtcttgggggtggaagcagttctgtggttcctttatacatcagttctagt
ctgatatctaattacattaaggaacttcagcatcaagggtcatctgctgcttctgaaatt
gagacagagaaactaaaacatgattaccaaaggtcaatgcaaatgactaaccaatggaat
aaaatgtatgaaaacttaaataaattttgtgtacaagaactgatggatggcactcaagct
acaaccttagatgaaaatcacaattaa

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