Phaseolus vulgaris (common bean): 137836005
Help
Entry
137836005 CDS
T03093
Name
(RefSeq) nuclear pore complex protein NUP93A-like
KO
K14309
nuclear pore complex protein Nup93
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137836005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
137836005
Messenger RNA biogenesis [BR:
pvu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137836005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_12
DUF4618
TPR_7
PrmA
Motif
Other DBs
NCBI-GeneID:
137836005
NCBI-ProteinID:
XP_068500902
LinkDB
All DBs
Position
5:complement(40093334..40101720)
Genome browser
AA seq
861 aa
AA seq
DB search
MANEDFSSWTDLLHSSTKLLEQAAPSAQFPPLQRNLDQLESLSKKLKSKTVRTEAPSQSI
AATRLLAREGINAEQLARDLKSFELKTTFEDVFPVEATSVEEYLQQVHEMAMVSAVQEAQ
KDNLRSFNDYMMKVLEEDWQKEKRDFLQSLSRISTLPRTNIAANSSVGTLPGQIASVSST
PQVSSGSSSMEIVPLSGRPIVEKKASVYAEVVKNLNKARESGLPFKPAAAFKGAYENLGI
DASGGKSVTMRKIWHLVQMLMGEDSAPQRVSKRMSLIIGARRHLEWGHEKYIMDTIQSHP
AQAALGGGVGNLHRIRAFLRIRLRDYGVLDFDAGDARRQPPVDTTWQQIYFCLRSGYYDD
ARNIALSSRASHQFAPLLTEWINTGGMVPEEIAAAASEECERMLRTGDRVGRTAYDKKKL
LLYAIISGSRRHIDRLLRDQPTLFSTIEDFLWFKLSAVRDCPSGPSSIVLSDSLIPYSLD
DLQSYLNKFEPSYYTKNGKDPLVYPYILLLSIQLLPAVLYLSKEAGDEGYNIDAVHLSIV
LADHGVLSEGAGSGQKLGVMDAYAEVSTIIRQYGSMYLRIGDLQMALEFYAQAAAAVGGG
QLSWTGRGNVDQQRQRNLMLKQLLTELLLRDGGIYLLLGARGSGEEGELGRFVTDPKARE
QFLIEAALQCQEAGMYDKSIEIQKRVGSFSMALDTINKCLSEAIIALFRGRLDGESRTAG
FIHSGNEILETYAYYPDVSHQEREHVFQQQTVLRQLESILSIHKLARLGHYVDALREVAK
LPFLPLDPRGSDSAVDAFENLSSHVQACVPDLLKVALSCLDNLTDSDGSLRALRAKIASF
IANNLKRNWPRDLYERVAQRL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaagacttcagtagttggactgatctgctacattcttcgacgaagcttcta
gaacaagctgcaccttctgctcagttccctccacttcagaggaacttagatcaactcgaa
tcattatccaagaagcttaaatccaaaaccgtaaggactgaggcaccgtctcaatctatc
gctgcaacaaggcttcttgctcgtgaggggataaatgcagagcagcttgcaagggatctg
aagtcatttgaactgaagacaacttttgaggatgtttttcctgttgaggcaacaagtgtt
gaagagtatctgcagcaggttcatgaaatggcaatggtctctgccgttcaggaagctcaa
aaggataatctcaggagtttcaatgattacatgatgaaagttttagaggaggattggcaa
aaagaaaagcgtgatttccttcagagtttaagtcgaatttcaacattacctaggacaaac
attgctgctaacagcagtgtgggtaccctcccaggtcagattgcgtctgtgtcttctact
ccacaagtctcatctggtagttctagtatggagattgttcccctgtctggcagacctatt
gtggagaaaaaggcatctgtctatgctgaggtagtgaagaatctgaataaagcaagggaa
tctgggttaccatttaaacctgcagcagctttcaagggtgcatatgaaaatttgggcatt
gatgctagtggtggaaaatcagtaacgatgcgaaagatatggcaccttgttcagatgctg
atgggtgaggactcagccccgcaacgtgtttcaaaacggatgtcattgattattggcgca
agacgccaccttgaatggggacatgaaaaatacataatggacaccatacaaagccatcct
gcacaagctgcacttggtggtggtgttgggaatttgcacagaatccgtgcctttcttcgg
attcggttgagggattatggagtactggattttgatgctggtgatgctcggcggcagcct
cctgttgatacaacatggcagcagatatatttttgcctgaggtctggttattacgatgac
gcaagaaatattgccctatcttcacgtgcttcacatcaatttgctcctttgctcacagag
tggattaatactggagggatggtcccagaagagattgcagctgctgcatcagaggaatgt
gaaagaatgctgagaactggtgatagggttggtcgaactgcatatgacaagaaaaagtta
cttttgtatgccatcatatcaggttcccgaagacatattgatcgcctgctcagagatcag
ccaactctctttagtacaatagaagatttcttgtggttcaaattgtcagctgtgcgggat
tgtcctagtggaccttcatccattgttctaagcgatagtctgattccatacagcctggac
gatttgcaaagttacctgaataaatttgagccctcatactatacaaaaaatggaaaagat
cctctggtatatccctatattttgcttttaagcattcaattgcttccagctgtattatac
ttgtctaaggaagcaggagatgaagggtataacattgatgctgtacacctatcaattgtg
ctagctgatcatggggtcctttctgaaggtgctggttctgggcaaaagttgggagtgatg
gatgcttatgcagaagtatccaccattatcaggcaatatggatctatgtatctacgtatt
ggtgatctccaaatggccctagaattttatgcacaagctgctgcagcagtgggcggtggg
cagttgtcgtggactggtagaggtaatgttgatcaacaaaggcagagaaatctgatgctg
aagcagcttctcacggaactattattaagggatggaggcatatatcttttacttggtgca
agaggttccggagaagaaggtgaattgggacgttttgtgactgatccaaaagcaagggaa
caatttctaattgaagctgcattgcagtgtcaggaggctgggatgtatgacaaatctata
gaaattcagaagagagtaggttccttctcaatggcgctggataccatcaacaagtgcctt
tctgaagctattattgcccttttccgtggaagattagatggtgaaagtcggactgccggc
tttatccattctggcaatgagattttggagacatatgcgtattatccagatgtcagtcat
caagagagagaacacgtttttcagcagcaaaccgtgttacgacaacttgagtcaatattg
tcaattcataaattagcaagactggggcattatgtcgatgcattaagggaggttgctaaa
cttccatttcttcctctagaccctcgaggctctgatagtgctgttgatgcgtttgaaaat
ttatcttcgcatgtccaagcttgtgttccagatcttttgaaagttgcccttagttgtctg
gacaatttgactgactctgatggatcacttcgtgccttaagggctaagattgcgagtttt
attgcaaataatttaaagaggaattggcctcgtgatttgtatgagagagttgcccagagg
ttgtga
DBGET
integrated database retrieval system
