Phaseolus vulgaris (common bean): 137836044
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Entry
137836044 CDS
T03093
Name
(RefSeq) pre-mRNA-processing-splicing factor 8A
KO
K12856
pre-mRNA-processing factor 8
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137836044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvu03041
]
137836044
Spliceosome [BR:
pvu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
137836044
Complex C
U5 SnRNP specific factors
137836044
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
137836044
NCBI-ProteinID:
XP_068500958
LinkDB
All DBs
Position
5:complement(40405159..40417236)
Genome browser
AA seq
2358 aa
AA seq
DB search
MWNNGQIVPPGTSVPPIFPPPAAQPSYTVLPPPPPPPAPMETEADAEARLEEKARKWQQL
NSKRYSDKRKFGFVETQKEDMPPEHVRKIIRDHGDMSSKKYRHDKRVYLGALKFIPHAVY
KLLENMPMPWEQVRDVKVLYHISGAITFVNEIPWVVEPIYLAQWGTMWIMMRREKRDRRH
FKRMRFPPFDDEEPPLDYADNLLDVDPLEPIQLELDEEEDSAVYTWFYDHKPLVKTKLIN
GPSYRKWHLSLPIMATLHRLAGQLLSDLIDRNYFYLFDMESFFTAKALNMCIPGGPKFEP
LYRDMEKGDEDWNEFNDINKLIIRSPLRTEYRIAFPHLYNNRPRKVKLCVYHTPMIMYIK
AEDPDLPAFYYDPLIHPITSANKDRREKRVYEEDDDDDWILPDGVEPLLKDTQLYTDTTA
AGVSLLFAPRPFNMRSGRMRRSEDIPLVSEWYKEHCPPSYPVKVRVSYQKLLKCFVLNEL
HHRPPKAQKKKHLFRSLQATKFFQTTELDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLD
YNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANVQFRLGNVDAFQLADGLQ
YTFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMWRVWLF
FLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDVLDAMPE
GIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNVAHYNRE
RIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEAVAIYTTTVHWLES
RKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQAYDNPHEALS
RIKRHLLTQRAFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPNW
IKPADSEPPPLLVYKWCQGINNLQGIWDTSDGQCVVMLQTKFEKFFEKIDLTMLNRLLRL
VLDHNIADYVTAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQYYGLVLDLLLLGLTRAS
EIAGPPQMPNEFITYWDTKVETRHPIRLYSRYIDRVHILFRFTHEEARDLIQRYLTEHPD
PNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENSFVSVYS
KDNPNLLFSMCGFEVRILPKIRMTQEAFSNTRDGVWNLQNEQTKERTAVAFLRVDDEHMK
VFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLLVKCENKIQTR
IKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSQQTDVGVTHFRSGMS
HEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQAQNRRLTLEDLEDSWDRGIPR
INTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQAL
GGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWW
SPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVLD
QELDALEIETVQKETIHPRKSYKMNSSCADILLFAAHRWPMSKPSLVAESKDVFDQKASN
KYWIDVQLRWGDYDSHDIERYTRAKFMDYTTDNMSIYPSPTGVMIGIDLAYNLHSAFGNW
FPGSKPLLQQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIW
FVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAK
WKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLK
IEKFGDLILKATEPQMVLFNIYDDWLKSISSYTAFSRLILILRALHVNNEKAKMLLKPDK
TIVTEPHHIWPSLSDDQWMKVEVALRDLILSDYAKKNNVNTSALTQSEIRDIILGAEITP
PSQQRQQIAEIEKQAHEANQVTAVTTKTTNVHGEELIVTTTSPYEQAAFGSKTDWRVRAI
SATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQISGYMYGISPPDNPQ
VKEIRCIVMPPQWGTHQQVHLPSALPEHDFLNDLEPLGWMHTQPNELPQLSPQDLTSHAK
ILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYLPTHYEK
VQMLLSDRFLGFYMVPDNGPWNYNFMGVRHASGMKYGVKLGTPREYYHEDHRPTHFLEFS
NMEEGETVAEGDREDTFS
NT seq
7077 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacaacggccagattgtgccgcctggaacttccgttcccccgatttttccacct
ccggccgcgcaaccgtcgtacacggtgcttccaccgccgcctccgcctcccgcacctatg
gagaccgaggccgatgcggaggcgcggctcgaggagaaggctaggaaatggcagcagctc
aattcgaagcgctacagtgacaagaggaaattcggatttgtcgagacgcagaaagaggac
atgcctcctgaacatgtcaggaaaatcatcagggatcatggtgacatgtcctcaaagaaa
tatcgtcatgacaaacgtgtttatcttggagcacttaaattcataccacatgcagtttac
aagctcttggaaaatatgcctatgccatgggagcaggttcgagatgtgaaggtcttgtat
catatttctggggctatcacatttgtcaatgaaataccatgggttgttgagcctatttat
cttgctcagtggggtaccatgtggatcatgatgagaagggagaagagggatcgtcgccat
tttaagaggatgcggtttccaccatttgatgatgaggaacctccactagactatgccgat
aatcttttagatgttgatcctctagagcctattcaactggagctagatgaagaggaagat
tctgctgtgtatacttggttttatgaccataaacctcttgtgaaaacaaagcttataaat
ggtcctagttaccggaaatggcatctatccctccctataatggcaactctacatcgatta
gctggccaacttctgtctgatttaattgaccgcaattatttctacttgtttgacatggag
tcattttttacagcaaaggctttgaacatgtgtattcctggtggacctaaatttgagcct
ctttaccgtgatatggagaagggagatgaggactggaatgagtttaatgacatcaataaa
ctcattataaggtcaccacttcggacagagtatagaattgcttttcctcacctttataac
aataggcctcgcaaagtaaagctttgtgtgtaccatactcccatgataatgtacataaaa
gctgaagatcctgatctacccgcattttattatgaccccttgatacacccaataaccagc
gctaacaaggaccgacgtgagaagagagtttatgaagaggatgatgatgatgattggata
ttaccagatggtgtggagcctttgcttaaagatacacaactttatacagacactacagct
gctggagtctccttgctatttgctcctcgtccttttaatatgagatctggtcggatgagg
cggtcagaggatattcctctcgtgtcagagtggtataaggagcattgtcctccatcatat
ccagtcaaagttcgggttagttaccaaaagttgttgaaatgttttgtgttgaacgagctg
catcatagacctcccaaggctcaaaaaaagaagcacttattccgttctctccaagcaaca
aagtttttccaaaccacagaacttgattgggtagaggcaggtcttcaagtttgtaggcag
gggtataacatgctgaatctgttaatacacaggaaaaatttgaactaccttcaccttgat
tataattttaatctaaagcctgtgaaaaccttgactacaaaagagcggaagaaatcacga
tttggcaatgctttccatctatgtcgtgagattctccgtctgactaagcttgtggttgat
gctaatgttcagttccgattgggaaatgtggatgctttccagctggctgatggtctgcag
tatactttttcacatgttggacaattgaccggtatgtatcggtataagtacaggcttatg
aggcaaataagaatgtgcaaggatttgaagcacttgatttactatcgttttaatacgggg
cctgttgggaagggacctggatgtgggttttgggcaccgatgtggagggtttggttattt
tttcttcgtggtattgtgcctcttcttgaacgatggctgggcaatctacttgcacgccag
tttgaggggcgtcactcaaaaggcgtggcaaagactgtcactaaacagcgtgttgagagc
cactttgacttagagcttcgtgcagcagttatgcatgatgttcttgatgccatgccagag
ggtataaagcaaaacaaggcaagaactattttgcagcatttgagtgaggcttggcgatgc
tggaaagcaaatattccctggaaggttcctggtcttcctgttccaattgagaacatgatt
cttcgatatgtgaaatcaaaagcagactggtggacaaatgttgcacattataatcgagag
cgtataagaagaggtgcgactgtggataagactgtctgtcggaaaaatcttggaagattg
acacgcctctggttgaaggcagaacaggaacgtcaacacaattatttgaaagatggtccc
tatgttactcctgaagaagctgttgcaatctatacaacaactgtccattggttggaatct
aggaagttctcccctattccatttccacctttatcatacaagcatgacaccaagctgctt
atccttgcacttgagaggttgaaagaatcttatagtgttgcggtgaggttaaatcaactg
caaagagaagagctggggctgattgaacaagcttatgacaatccccacgaggcattatca
agaattaaacggcacctgctcacacagcgtgccttcaaagaagttggcatagagtttatg
gatttatatagctacttgattccagtctatgagatagagcctcttgagaaaattacagat
gcatatcttgatcaatacctgtggtatgaaggtgacaaacgtcatctctttcccaactgg
atcaagccagcagattcagagccacctccccttttggtttacaaatggtgtcaaggtata
aacaatttgcaaggtatatgggacaccagtgatggtcagtgtgttgtgatgctgcaaact
aagtttgaaaaattctttgagaagattgatttaacaatgctgaacaggcttctgcggctg
gttttagaccataatattgctgattatgtcactgcaaagaacaatgttgtgttgtcatac
aaggatatgagccacacaaattcatatggtcttatccgtggtcttcagtttgcttccttt
gtagttcagtattatggattggtattagatcttttgcttcttggtctgactcgagccagt
gagattgctggcccaccacagatgccaaacgaattcattacttattgggatacaaaagtt
gagactaggcatccgatcaggctttattctaggtatatagaccgggttcatatattattt
cgcttcacccatgaggaggctcgggacctcattcagcggtatctgactgagcaccctgat
cctaacaatgagaacatggtgggctacaataataaaaagtgctggccaagagatgctaga
atgaggctcatgaaacatgatgtcaatcttgggaggagtgtcttttgggatatgaagaat
cgtcttcctcgaagcatcacaacattggagtgggagaacagctttgtttctgtttacagc
aaggataatccaaacttgctattcagcatgtgtgggtttgaagtaaggatacttcctaaa
attagaatgacccaagaagcattcagtaacacaagagacggtgtctggaatctccagaat
gaacagacaaaagaaaggacagctgttgctttcttacgagttgatgatgaacacatgaaa
gtttttgagaatcgtgtgagacagattcttatgtcttctggttccactacattcacgaaa
attgtcaataagtggaatacagctttaattgggcttatgacctatttccgagaggcaact
gtgcatacccaagagctgttagatttgctagttaaatgtgaaaataaaattcagactcgt
attaagattgggctcaactcaaagatgcctagcaggttcccacctgtcattttctacact
cctaaagaaataggagggcttggaatgttgtccatgggtcacattttgattccacaaagt
gatcttcgatacagtcagcagacagatgttggagtaacccacttcaggagtggaatgagt
cacgaggaggaccaactgattcccaacctttatcgttatatacagccttgggagagcgag
ttcattgattcacagcgtgtctgggctgaatatgcgttgaaaagacaggaagcacaggca
caaaacagacggttgaccctcgaagatctggaagattcatgggatagaggtataccacgt
attaacactctgtttcaaaaggatagacacactttggcttatgataaaggatggagggta
cgaactgatttcaagcagtaccaagttctgaaacaaaaccccttctggtggacacatcag
aggcacgatgggaagttgtggaatttgaacaattaccgaactgatgttattcaagctctt
ggaggagttgaaggaattctcgaacatactttattcaaaggaacatactttccaacttgg
gaaggtcttttttgggaaaaggcatctggttttgaagaatccatgaagtataagaagctc
accaatgctcagagatctggtctcaaccaaatacccaaccgaagatttacgctgtggtgg
tcgccaaccattaaccgagccaatgtttatgtgggtttccaagtgcagctagatctgact
ggtattttcatgcatggaaaaataccaactttgaagatatcccttattcagatattccga
gctcatttgtggcagaaaatccatgagagtgttgttatggatctctgtcaggttttggat
caagagttggatgctttggaaattgaaaccgttcagaaggaaaccatccatccaaggaaa
agttacaaaatgaacagttcttgtgctgatattcttctctttgccgctcatagatggcca
atgtcgaagcccagtcttgtagctgaatctaaggatgtttttgatcagaaggcaagcaat
aagtactggattgatgttcaactacgatggggtgattacgactctcacgatattgaacgt
tacactagggctaagtttatggattatacaacagataacatgtccatatatccatctcct
actggtgtaatgattggcattgatttggcatataatttgcattctgcatttggtaactgg
ttccctgggtcaaaaccactacttcaacaggccatgaataagatcatgaagtccaatcct
gcactatatgtgttgagggaacggataaggaaaggtttgcaattgtactcttctgagccc
actgaaccatatttgtcttctcaaaactatggagagatattcagcaaccaaatcatatgg
tttgttgatgacacaaatgtgtatcgtgttactattcacaagacttttgaaggaaatctt
actacgaagcccatcaatggtgctatatttattttcaatccgaggactggacagttgttt
ctcaaggttattcataccagtgtgtgggctggtcagaagcgtcttgggcagttggcaaag
tggaaaacagcagaggaagttgctgctcttgtaaggtctttgcctgtggaagaacagcca
aagcaaatcattgtcactcgaaaaggaatgttggatccattggaggttcacttgttggat
ttccccaacattgttattaaaggaagtgaactgcaacttcctttccaggcatgtttgaaa
attgaaaaatttggggatcttattttgaaggccacagaaccacaaatggtgttgttcaac
atctatgatgactggttgaagagtatatcttcatacactgcattctctaggctaattctg
attctgcgtgcacttcacgtgaataatgaaaaggcaaaaatgttactgaagcctgataaa
accatcgtcaccgaacctcatcacatctggccttctctaagtgatgaccagtggatgaag
gtggaggttgcgttaagagatcttatactttcagattatgccaagaaaaataacgtcaat
acttcagccttgactcaatctgagatccgtgatattatacttggagctgagattactcca
ccttctcaacagcggcaacagattgcagagattgagaaacaggcacatgaagcaaatcag
gtgacagctgtaacaacaaaaactacaaatgttcatggtgaagaactcatagttaccacc
actagtccttatgagcaagccgcttttggttctaagactgactggcgtgtcagggcaata
tctgccacaaatttatatcttcgtgtgaaccatatatatgtgaactctgaggatataaag
gaaactggatacacctatattatgccaaagaatattttgaaaaagtttatatgcatagca
gatcttcgaacgcaaatttctggttacatgtatggcataagtcctccagacaatcctcag
gttaaagaaattcgctgtattgtgatgccaccacaatgggggactcaccaacaagttcat
ctgccatcggctcttccagagcatgatttcttaaatgatttagagcctttgggatggatg
catacgcaaccaaatgaacttcctcagttgtcgcctcaggatctcacttcacatgccaag
atcctagagaacaataagcaatgggatggggagaaatgtattatattgacttgcagcttt
actcctggttcttgttctttaactgcatataagctcactccatctggttatgaatggggt
cgtgtcaataaggatacgggaagcaatccacatggttaccttcccactcattatgaaaag
gtgcagatgcttctcagtgatcgcttccttggtttctatatggttcctgataatggacca
tggaattataacttcatgggagtgagacacgcgtcggggatgaaatatggagtgaagctt
gggactccaagggaatattaccacgaggatcatagaccaactcatttcttagagttcagc
aatatggaggaaggggagacagttgccgagggagatcgcgaggacacattctcttga
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integrated database retrieval system
