Phaseolus vulgaris (common bean): 137836097
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Entry
137836097 CDS
T03093
Name
(RefSeq) ubiquitin receptor RAD23b-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03420
Nucleotide excision repair
pvu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
137836097
09124 Replication and repair
03420 Nucleotide excision repair
137836097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvu03051
]
137836097
03400 DNA repair and recombination proteins [BR:
pvu03400
]
137836097
Proteasome [BR:
pvu03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
137836097
DNA repair and recombination proteins [BR:
pvu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
137836097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
CUE
TECR_N
UBA_3
UBA_RAD5A
Ubiquitin_2
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
137836097
NCBI-ProteinID:
XP_068501033
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Position
5:complement(40774759..40780490)
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AA seq
367 aa
AA seq
DB search
MKLTVKTLKGSHFEIRVQPSDTIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA
DNKVSEDGFLVVMLSKSKTSGSAGTSSSQLASNPPTTVSTPNSPSLVQTQSTNNNAPARD
VTTTDVTTDTYGLSASNLVAGSNLEQTIQHIMDMGGGSWDRDTVSRALRAAYNNPERAVD
YLYSGIPEAAEIAVPAAPYPDSRTTETGGVTAGAVPGVPNSSPLNMFPQEAISGVGAGIG
SLDFLRNNPQFQVLRSMVQSNPQILQPVLQELGKQNPGLLRVIQEHHAEFLQLINEPIEG
SEGDIFDQPEQDMPHAINVTPAEQEAIGRLEAMGFDRASVIEAFLACDRDEQLAANYLLE
NAGDFED
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccgtgaaaactttgaaaggcagccatttcgaaatcagggttcagccctca
gacactattatggctgtcaagaaaaatattgaagatgtacaaggcaaagataattaccca
tgtggacagcaattgctgattcacaatggtaaggttttgaaagatgaaactacattagca
gacaataaggtctctgaggatggctttcttgttgtaatgcttagtaagagtaaaacctcg
ggatctgctggtacttcatcaagtcagcttgctagcaacccacctacaactgtatcaaca
ccaaattccccgtctctagttcaaacccaatctacaaacaacaatgcacctgcaagagat
gtcacaactacggatgtcactacggatacttatggcctgtctgcttcaaatttagttgct
ggtagtaatcttgagcagactattcagcatattatggacatgggtggtggcagttgggac
agagatacagttagtcgtgccctccgagcagcttacaataacccagagcgtgctgtggac
tacctgtattctggaattcctgaagccgcagaaattgctgtgccagctgctccttaccca
gatagtcggacaactgaaacaggtggggtcactgccggagctgttcctggggtccctaac
tcatctcccttgaatatgtttccacaggaggctatttctggtgttggagctggaattggg
tcgcttgactttcttagaaacaatccccagtttcaagtattgagatcaatggtgcaatcc
aatccacaaattctgcagcctgtacttcaggagcttggaaagcagaatcctggtctctta
agagtaattcaagaacatcatgctgagtttctgcagttgattaatgaacctattgagggt
tcagaaggtgatatatttgatcaacctgagcaagacatgcctcatgctatcaatgtgacg
ccagctgagcaggaggcaattggaaggcttgaagctatgggatttgatagagcctcagtc
atagaggcatttttagcatgtgaccgtgacgagcaattggcagccaactacttattagaa
aatgctggagattttgaggattaa
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