Phaseolus vulgaris (common bean): 137836459
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Entry
137836459 CDS
T03093
Name
(RefSeq) probable CCR4-associated factor 1 homolog 9
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137836459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
137836459
Messenger RNA biogenesis [BR:
pvu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137836459
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
137836459
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
137836459
NCBI-ProteinID:
XP_068501266
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All DBs
Position
4:complement(19770175..19770951)
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AA seq
258 aa
AA seq
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MTFSCGSVMTRSVWSYNLELEFELIRSIIALYPFISMDTEFPGVIFPSHPGFRHPQNNYA
VMKANIDGMHLIQVGLTFSDSHDNLPTFGTSNRFIWEFNFCEFDVTRHAHAPDSITLLRS
QGMDFDKNRKYGVSIVRFAELMMILGLLCNNNIQWIAFHSAYDFGYMLKILSQRFFYMQP
YLPPNLGDFLQLVKFFFGYRVYDVKHLIRFCPNLHGSLDRVSESLGLDNNARKSHHAGSD
SLVTLHVFNKIKTLYFHT
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgacattttcttgcggttctgtaatgacgagatcagtgtggtcttacaaccttgaattg
gagttcgagttgattcgttccatcattgccttgtatcctttcatctctatggacacagag
ttccccggcgtcatctttccatcgcatccaggattccgacatccacaaaataattacgca
gtgatgaaagctaatatagacggtatgcatctcatccaagtgggtctcaccttttcagac
agccacgacaaccttccaacctttggaacctcgaaccgcttcatttgggaattcaacttc
tgtgagtttgatgtgacacgccatgctcatgctcctgactccatcaccctcctccgaagt
caaggcatggattttgacaagaatcgaaagtatggagtgagcattgtgcgatttgccgag
ttgatgatgatcttaggactcctctgcaacaataatattcagtggattgcttttcacagt
gcctatgattttgggtacatgttgaagatattgagccaacgctttttttatatgcaacca
tatttacctcccaacttaggtgactttcttcaacttgttaaattcttctttggatacaga
gtatatgacgtcaaacatctcatcagattttgtcccaaccttcatggcagtttagataga
gtttctgagtccctaggtttggataataatgccagaaaaagtcatcatgcaggctccgat
agcttagtcactctccatgtttttaataaaattaaaactctctattttcatacatag
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