Phaseolus vulgaris (common bean): 137836674
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Entry
137836674 CDS
T03093
Name
(RefSeq) zinc finger CCCH domain-containing protein 41
KO
K13192
RNA-binding protein 26
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvu01009
]
137836674
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
137836674
03041 Spliceosome [BR:
pvu03041
]
137836674
Protein phosphatases and associated proteins [BR:
pvu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
137836674
Messenger RNA biogenesis [BR:
pvu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
137836674
Spliceosome [BR:
pvu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
137836674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
zf_CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
137836674
NCBI-ProteinID:
XP_068501463
LinkDB
All DBs
Position
4:547220..555278
Genome browser
AA seq
922 aa
AA seq
DB search
MELKVASPKPESVAPSDCVSDPEEKEVSEEDDDDRNHKHRRRDARSQSLERDVSDPVINR
PFKKRNKNFGNRHPFRVNESQAFETLKTYSDATTDKDIYFKFDRRRPGLTSVPRGPLDMS
QRLRGNQSFTGDPGVGRGRGRESGFWNQRESRFGSMDVASQMVPQGSIPPSLYAGRGLPN
VSNAQNASWNTFGLIPAVPNGGLDMLHPMSLQGTLRPSINSSLNVNISRQRCRDFEERGF
CLRGDMCPMEHGVNRIVIEDVQSLSQFNLPVSLPSAHLIGGPAGSESLHSVNASATLMNN
KCLPGKVSKSVVNDDGLALDGAFTGPAGCTSGADLYDPDQPLWNDSGLEPSNALLTLQSS
KSDETEPILNDAPDGDCPVGTARTSVSSQGASSSVWARIGSSKNRFDMKEKTNVGMSSFH
YPENQLKEDNGELLGAHNSSFQVKQNIADDADPKALDASLKAQTDSMRTIRKSSQKALRT
LFVNGIPHKNNKREALLAHFKKFGEVIDIYIPLNTERAFVQFSKREEAEAALKAPDAVMG
NRFIKLWWANRDSIRSDSTNTGNGVIVTPRGQAAAFVPSHPIVTDRGKDIHQIDASKTTY
EVSSPTDQPKPAITDGLKVPPPLQKKLVNLENLKEELRKKQEMLDQKRNEFKRQLNKFEK
QASGLKGELSNEQATKRLKLGTASDVAKLASPPLSSDADVGITSPNAEAAADKNKQLVNT
VSQSPKTSTAARLQEPTGLKHPIQPLMPVNRYKLDNRPAAFRIIPPVPAGLTNVAVLKEH
FSPYGELSSVELEDVQVNDSSQQEAHITFTTRWAAERAFINGKCWNDLNLKFMWLTPTGS
SNSTGGRERSLSAPKEPLDSDDHSKEKLGNSLNQEVIESDGENKNSETRNGLELMEMEPS
EDPQSTTRQVSSPEHSPEGSVC
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaaagtagcgtctccaaaacctgaatctgttgcaccgtctgattgtgtcagt
gatccagaggaaaaggaagtgagtgaagaagatgatgatgatcggaatcataagcatcga
aggagggacgctcgctctcaatctttggagagagatgtttcagatcctgttattaatagg
ccattcaaaaagcgtaacaaaaattttggtaataggcatcccttcagggtaaacgaatca
caagcctttgaaacactgaaaacttacagtgatgccaccactgataaagatatatacttc
aagtttgatagaaggcgccctggcttgacttcagttcctcgaggacctttggatatgagc
caaagactacgtggaaaccaatcttttactggagatcctggtgttggcaggggaagaggc
agggaatctggtttttggaatcaacgtgaatctaggtttggctcaatggatgttgcttca
caaatggttccacaagggtcaattcctccaagcctttatgctggacgtgggttacccaat
gtttcaaatgcacaaaatgcatcgtggaacacatttggtttaattccagccgtgcccaat
ggtggtctagatatgcttcatccaatgagtttacaaggaacacttagaccatctattaat
tcatctttgaatgtgaatatttctcgccaacggtgtagagattttgaggagcgtggattt
tgcctaagaggggacatgtgtcctatggaacatggtgttaatcgaattgtcattgaagat
gttcagagtctttcacagtttaaccttcctgtttcgcttccaagtgcacacttaattgga
ggtcctgctggatctgaatctttacattcagtaaatgcttctgccactttgatgaacaac
aaatgtttacctggaaaagtttctaagtctgtagtcaatgatgatggtttggcattggat
ggtgcttttactggtcctgctggttgcacaagtggagctgatctttatgatcctgatcaa
ccactttggaatgatagtggtctggagccttcaaatgcactcctaactcttcagtcatct
aagagtgatgaaactgagcccatattgaatgatgctccagatggtgattgtccagttgga
actgctagaacatctgtcagttcacagggtgccagttcatctgtctgggccagaattggt
agttcaaaaaacagatttgacatgaaagagaaaactaatgttggaatgagttcttttcat
tatcctgagaatcaattaaaggaagataacggtgaattactaggtgctcacaattcttcc
tttcaagtaaagcaaaatatagcggatgatgcagacccaaaagccttggacgcttctttg
aaagcacaaactgatagtatgcgtactatacgaaagtcatcacaaaaggcattgcgtact
ctatttgtaaatggaatacctcataaaaataacaagagagaggctcttctagctcatttt
aagaagtttggggaagttattgacatttatattccattgaacactgaacgagcttttgtg
caattctccaagagggaagaggctgaagctgctttgaaggcaccagatgctgtaatgggt
aatcgttttatcaagctatggtgggctaatcgtgatagcattcgcagtgatagtaccaac
actgggaatggcgtgattgtaactcctcgtgggcaagcagctgcttttgttccatctcat
cccattgtcactgataggggaaaagacatccatcaaattgatgcttcaaagactacatat
gaagtatcatcgcctactgatcaacctaagcctgccatcactgatggactcaaggttccg
cctcctttgcagaagaagcttgtaaacttggagaatctaaaggaagaactgcgcaagaag
caggaaatgctagatcaaaagcgcaatgagttcaagcgccagttgaacaaatttgagaaa
caagcttctggactcaagggtgaattgtctaatgagcaagccaccaagaggctcaaatta
ggcactgcatctgatgttgccaaactggcttctcctcctctatcatcagatgctgatgtt
ggcatcacatccccaaatgctgaggcagcagctgataagaataaacagctggtcaatact
gtatcccaaagtcctaaaacaagtacagcagcaagactgcaagaacctacaggcttgaag
cacccaattcaaccattaatgcctgtaaatagatacaaattggacaatcgtcctgctgca
tttcgtatcatcccacctgtgcctgctggtctaactaatgttgctgttttgaaggagcac
ttctcaccttatggcgaactttcctccgtagagctagaagacgtgcaagtaaatgatagt
agccaacaagaggctcatataactttcactactcgttgggcagccgagagggcatttatt
aatggtaaatgctggaatgacctgaatctgaaattcatgtggctgacacctactggttct
agtaattcgacgggtggtagagaacgttctctatccgctcccaaggagcccttagattca
gatgaccattccaaagaaaaattaggaaactctttgaaccaggaagtaattgaatcagat
ggcgagaataaaaattctgaaactagaaatggtttggagcttatggaaatggaaccaagt
gaagatccccagtctaccacaaggcaagtttcttctcccgaacactcacccgagggaagt
gtctgttga
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