Phaseolus vulgaris (common bean): 137836958
Help
Entry
137836958 CDS
T03093
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvu03036
]
137836958
Chromosome and associated proteins [BR:
pvu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
137836958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
PHD_2
IFRD
LETM1_C
Motif
Other DBs
NCBI-GeneID:
137836958
NCBI-ProteinID:
XP_068501869
LinkDB
All DBs
Position
4:complement(4068983..4083708)
Genome browser
AA seq
1803 aa
AA seq
DB search
MSFPATSGAGAPFSGSSGIGLSNTVHSELAACLPLPSLPVFCGASDQDLRLVDSPARLSR
VDVLAQSGKIAELLRHTDVSYLNLRDEAKGVPYIYVEPLELHDEVLRCNPEAFEYSTAGP
VKEQISGSALPEKRQSESSFSIPSQTQKDYNATHSRQLDNFSTNDISTLSFKKSKVKKKG
GDGISIAPDSAELQGAHIQRFCDFLEDLCNKSELNSDDRDEAEWLSLPLSDLRLLVNEIT
SIREKKLLHLVPIEVLVRLLKVLNHQIHRAEGLSIEECDNSSDSELVSSVFIALESIHAA
LAVMAHTDMPKQLYNEEIIERILEFSRRQIMDVMCACDPSYRALHRPSENTAFEVDDYEE
NDAEFGSASKKRRTNKTLKLKKSASNRLSTAVNTILQKLCTVLGLLKDLLLIERLSDSCI
LQLVKTSITTFLVDNIQLLQLKAISLLSAIFYLYTQHRIYVIDEMVQLLWKLPYSKRALR
SYHVREEEPRQIQMVTALLIQLIHCSANLPDALRKASNGNSVLEASVDASSPTKSYEAVT
EACCLFWSRVLQRLASVKTQDASELKSIIENLVTDLLTTLNLPEYPASVSILEVLCVLLL
QNAGPKSKDVSTRTMAIDILGTIAARLKRDALVCSQEKFWILQDFLSPDAHAEHQEKDMC
CVCLGGRVENLFTCHGCQRLFHADCLGIKEHEISSRNWSCQTCICHKQLLVLQSCCNSEH
KNNGKKNSKASKDSEVSKHDINQQLLLNYLQDVTSPDDLHLFICWFYLCLWYKDDSNCQQ
NSIYHIARMKSKIIVRDSGTVSSMLTRDSIKKITLALGQNSSFCRGFDKILSILLVSLME
NSPVIRAKALKAVSIIVEADPEVLGDKRVQIAVEGRFCDSAISVREAALELVGRHIASHP
DVGFKYFEKIAERIKDTGVSVRKRAIKLIRDMCTSDANFSGFTRACTEIITRVSDDEASI
QDLVCKTFSEFWFEEPHGSQTQVFGDGSTVPLEIVKKTEQIVQMLRGIPNNQLLVTVIKR
NLSLDFLPQSAKATGINPVSLATVRKRCELMCKCLLEKMLQVEEMNSDEVEVRALPYVLL
LHAFCLVDPTLCAPASNPSQFVVTLQPYLKTQVDNRMVAQLLESILFIIDAVLPMLGKLP
PIIVGELEQDLKQMIVRHSFLSVVYACIKCLCSVSKMAGKGAAVVEQLVQFFFKCLDTQA
VDNNQKVGRSLFCLGSLIRYGNQLLANSSNKIVDFGSSVRLFIRHLSAEDFVVRVRSLQA
LGFVLIARPEYMLENSVGKILEETLSSATDTRLKIQGLQNMYEYLLDAESQMGIDKDDHN
VAGYTVGARQSVPVAAGAGDTNICGGIVQLYWDNILGRCLDFNEQVRQSALKIVEVVLRQ
GLVHPITCVPYLIALETDPLESNSKLAHYLLMNMNEKYPAFFESRLGDGLQMSFMFMQSI
CGGSENVDTKIQSKMPNSGKGKPEAGPLAQAKLGVSRIYKLIRGNRVSRNKFLSSIVRKF
DNPRWNKLVIAFLTYCTEVLALLPFISPDEPLYLIYAINRIVQVRVGPLEANFKAWSSSI
SNHSTPYGNGMYQQAPEESTVATHVMSVDLNGSIQQNVDAHLNSNDMRSLDLNGSYHQPL
DYSYKGSPEAKLHAAGYTNFSFSNDDLEKVQADCLSAIALQLLLKLKRHLKIMYSLDDAC
CQAYTPTELPKPGEVISRQNIAFNIGESQFSLPTNPQELLQRYQEFKHALREDTVDYSHY
SANIKRKRPTTTPRKVQARKAVHVSGGNYNEEDDDEDYSGGSTMRKISFSGSRRSSLRSS
RQY
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcccagccacttccggcgccggcgcgccgttctccggctcctctggcatcggc
ctctccaacaccgtccactccgagcttgccgcctgcctcccgctgccgtcgcttccggtt
ttctgcggcgcttccgaccaggacctccgtctcgttgactctccggcgcgtctcagccgc
gtcgacgtgctcgcgcagtccggcaagatcgccgagctgcttcgccacaccgatgtgtcg
tacttgaatttaagagatgaagccaaaggtgttccttatatatatgttgagcctttagaa
ctccatgatgaagttctcaggtgcaatcctgaagcatttgaatacagcactgcaggtcct
gttaaggagcagatctctggtagtgcattacctgaaaagaggcaatctgaatcaagtttt
tctatcccaagtcagactcagaaagactataatgcaacgcatagtcgccaacttgataat
ttttccacaaatgatatttctacactgtcttttaaaaaatcaaaagttaaaaagaaaggt
ggcgatggaatatctatagcacctgattctgctgagcttcaaggtgcccacattcaaagg
ttttgtgactttttggaggatttatgcaacaaatctgaattaaatagtgatgacagagat
gaagcagaatggttgtcactgcctctttctgatcttagattacttgtcaatgaaataaca
tctattcgtgaaaagaaacttctgcatttggtgcccatagaagtccttgttagactatta
aaagttctaaatcatcaaatacatagagcagagggcctgtcaattgaggaatgtgataat
agttcagattcagaattagtttcatctgtttttatcgcgttggagtccattcatgctgca
ttagcagtgatggcccatactgatatgccaaagcaactttataatgaagagataattgag
agaattctggagttttccaggcgtcagataatggatgttatgtgtgcatgcgacccatca
tatcgtgccttacatagacctagtgaaaacacagcatttgaagtagatgattatgaagaa
aatgatgctgaatttggttcagccagcaagaaacgacgcactaacaagactttgaagttg
aagaaatcagcatcaaacaggctctctactgctgtgaatactattcttcagaagttgtgc
actgttcttgggctactcaaagatttattgttaatagagaggttatcagatagttgcatt
ctacaacttgtaaaaacaagtattacaacatttttggttgataatatccagcttttgcaa
ttgaaggcaatcagtttactcagtgcgatattctatttatatacacaacatcgcatttat
gtgatagatgaaatggttcagcttctatggaaattaccttattcaaaacgagctttaagg
tcttatcatgtacgtgaggaagagccaaggcagatccaaatggtaactgctttgctgatt
cagttgattcattgtagtgctaacctacctgatgctttaagaaaagcatcgaatggtaat
tctgtattagaagcctctgttgatgctagttctccaactaaatcctacgaggcagttaca
gaagcttgctgtctgttttggagtcgtgtacttcaacgcttagcaagtgtgaagactcag
gatgcttctgagctgaaatccataatagagaatcttgttacagatttgctaacgactcta
aatttacctgaatatcctgcttcagtttctattcttgaggttctctgtgtcctactactt
cagaatgctgggccaaaatctaaggatgtctctacacgtaccatggcgattgatattctt
ggtacaattgctgcaaggttgaagcgtgatgctttggtttgtagccaagaaaagttctgg
atccttcaggatttccttagtcctgatgctcatgctgagcatcaagaaaaagatatgtgt
tgtgtctgtctggggggaagggttgaaaacctgtttacgtgtcatggttgccagaggctt
tttcatgctgattgcctgggcattaaagaacatgaaatttccagccgaaactggtcctgc
cagacatgcatctgtcataagcaactactggtattacaatcatgttgcaattctgagcac
aagaataatgggaaaaaaaattccaaagcatcaaaggattccgaagtttctaagcacgac
atcaatcaacagttacttttgaattaccttcaagatgtcacctctcctgatgatctgcat
cttttcatttgctggttttatctctgcttgtggtacaaagatgattcaaattgtcagcag
aactccatttatcacattgcaaggatgaaatcaaaaatcatagtacgggattctggcact
gtatcttctatgctgacaagggattcaatcaagaagattactttagctttgggccaaaac
agttcattttgccgagggtttgataaaattcttagcatacttctggtaagcttgatggag
aactctccagttattcgggcgaaggctttaaaagcagttagtatcattgtagaggctgat
ccagaggtattgggagataagcgtgtgcagatagctgttgaaggaaggttttgtgattct
gcaatatctgttagagaagcagcattggaacttgttggtaggcatattgcttcacatcca
gatgtgggttttaagtattttgagaagattgcagagagaataaaagatactggtgtaagc
gttcgaaaacgagctataaaactcattcgagatatgtgcacttcagatgctaacttctct
ggatttacaagagcttgcacagagataattacacgtgttagtgacgatgaagctagcatc
caggaccttgtttgcaaaactttcagtgaattctggtttgaggagcctcatggttcacaa
actcaggtctttggggatggcagtactgttccacttgagatagttaagaaaacagagcaa
attgttcaaatgttgagaggaatacccaataatcaacttcttgtaactgtaataaagcgc
aatttgtcacttgattttttgcctcagtctgcaaaagccacagggatcaatccagtatct
cttgcaacagtacgtaagcggtgtgagttaatgtgcaaatgcttgctggagaagatgttg
caggttgaggaaatgaacagtgatgaagttgaagtgcgtgcacttccatatgtgttgctc
ctgcatgcattttgtcttgtggacccaactctctgtgcaccagcttcaaacccctcccaa
tttgttgttactttgcagccatatctgaagactcaggttgacaatcgcatggttgcacag
ctgcttgagagtattctattcataattgatgctgtgctgcccatgcttgggaagttacct
ccaattattgttggggaacttgagcaagatttaaaacaaatgattgtccggcattctttc
ttgtcggttgtctatgcctgtatcaagtgcctctgctctgtaagtaagatggctggaaag
ggggctgctgtagttgaacaacttgttcagttcttcttcaaatgtttggatactcaggct
gttgataacaaccagaaagttggacgatctctcttctgtcttgggtcacttatccgttat
ggtaatcaattgttagcaaattccagtaataaaattgttgattttggaagcagtgtcaga
ttgtttatcaggcatctctctgcggaggattttgttgtcagagttagatctttgcaggca
ctagggtttgttttaattgctaggcccgaatatatgttggaaaattctgttggcaaaata
ctggaggaaacattatcctctgctactgatacacgccttaagattcaaggattacaaaac
atgtacgagtatcttctagatgctgaaagccaaatgggaattgataaagatgatcataac
gttgctggttacacagtaggagctcggcagagtgtacccgtcgctgctggtgcgggtgat
acaaacatatgtgggggtatagttcagttgtattgggataatattttgggtagatgtttg
gatttcaatgaacaagttcgtcaatcagccctgaagattgttgaagttgtgctgcgtcaa
ggtcttgttcatccaatcacctgtgttccgtacctaatagcacttgaaacagatcctctg
gagtcaaattcaaagttggctcattatcttctgatgaacatgaatgaaaagtatcctgca
ttttttgaaagccgcttgggtgatggacttcaaatgtcatttatgtttatgcaatctatt
tgtggtggttctgaaaatgttgacactaagatccaatctaagatgcctaattctggaaaa
gggaagcctgaggctgggccacttgctcaagctaaacttggggtttctcgaatatacaag
ctcatccgagggaaccgggtatcaaggaacaaatttttgtcctcaattgtgcggaaattt
gataatccaagatggaataaattagtaatcgctttcttaacttactgcacggaagtccta
gcattactgccattcatttcacccgatgagcccctttatttaatctatgctatcaatcga
atagttcaagtaagggtcggaccactagaagcgaattttaaagcctggagttcaagcatt
tcaaatcacagtacaccttatggaaatggaatgtatcaacaggcgccagaagagtctact
gttgccacccatgtaatgtcagtggatttgaatggctcaattcaacaaaatgtagatgct
catctaaattccaacgacatgagatccctagatttaaatggatcatatcaccaaccgcta
gattattcatataagggtagcccagaagcaaagctgcatgctgcgggttacacaaatttt
tccttctcaaatgatgatctagagaaagttcaggccgactgtttatcagcaattgcattg
cagcttcttttaaagcttaagagacacctaaaaatcatgtatagtctcgacgatgcctgt
tgtcaggcatatactcctactgaacttccaaaacctggagaggttatctccagacagaat
atagcctttaatataggtgaatctcaattcagtttgcctacgaatccgcaagaattgcta
caaagatatcaggaatttaagcatgctttgagggaagacactgttgattattcacactac
agtgcaaatataaaacgcaagagacctacaaccactccaaggaaagttcaagctcggaaa
gctgtacatgtgtcaggtgggaactacaacgaggaagatgacgatgaggattatagcggt
ggaagtacgatgcgcaagataagttttagcggcagccgcaggagtagccttagaagctct
aggcaatattga
DBGET
integrated database retrieval system
