KEGG   Phaseolus vulgaris (common bean): 137837316
Entry
137837316         CDS       T03093                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03030  DNA replication
pvu03410  Base excision repair
pvu03420  Nucleotide excision repair
pvu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    137837316
   03410 Base excision repair
    137837316
   03420 Nucleotide excision repair
    137837316
   03430 Mismatch repair
    137837316
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvu03032]
    137837316
   03036 Chromosome and associated proteins [BR:pvu03036]
    137837316
   03400 DNA repair and recombination proteins [BR:pvu03400]
    137837316
DNA replication proteins [BR:pvu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    137837316
  DNA Replication Termination Factors
   ELG1-RFC complex
    137837316
Chromosome and associated proteins [BR:pvu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    137837316
DNA repair and recombination proteins [BR:pvu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     137837316
  Check point factors
   HRAD17(Rad24)-RFC complex
    137837316
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 RCF1-5-like_lid AAA Rad17 Sigma54_activ_2 DUF815 AAA_5 RsgA_GTPase AAA_29 AAA_16 RuvB_N ABC_tran AAA_23 AAA_22 AAA_24 nSTAND3 nSTAND1 ATPase_2 TsaE
Other DBs
NCBI-GeneID: 137837316
NCBI-ProteinID: XP_068502394
LinkDB
Position
4:complement(13306312..13310222)
AA seq 354 aa
MLWVDKYRPKTLDHVMVHTDIGHNLKKLVTEQDCPHLLFYGPSGSGKKTLIMAVLRQMFG
TGAEKVKVENRTWKVNAGSRSIDMELTTLSSANHIEITPSDAGFQDRYVVQEVIKEMAKN
RPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR
CLNVRINAPSEEQILEVLELIGKKEELQLPPGFGARIAEKSNRNLRRAILAFESCRVQQY
PFTNKQTIPPMDWEDHISEIASDIMKEQSPKRLFQVRGKLYDLLINCIPPEIILKRLLYE
LLRKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKSFLIATFG
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgttgtgggtggacaaatatcgtcccaaaaccctcgaccatgttatggtccacacagac
atcggtcacaatctcaagaaattggtgacggaacaagattgcccccacttactcttctat
ggcccttctggctctggcaagaaaaccctaatcatggctgttctccgccaaatgttcgga
actggtgccgaaaaggtgaaggtggaaaataggacgtggaaagtgaatgctgggagtaga
tctattgacatggagttgacaacattgtcaagtgccaatcacattgaaataactccaagt
gatgcaggatttcaagacagatacgttgttcaagaagtaatcaaagaaatggctaagaat
agacccattgatactaaggggaagaaaggatttaaagtactcgttctcaatgatgttgac
aaactctctagagaagctcagcattctctccggagaacaatggagaaatacagtgcttat
tgcagactaattctatgttgcaatagttcttcaagagtcacagaagcaatccgctctaga
tgtctcaatgtacgaataaacgcaccaagtgaagagcagattcttgaagttttagaactc
attggtaagaaagaagagctgcagctacctcctggttttggtgctcgcattgcagagaaa
tccaataggaatttaaggagagccatattggcatttgagtcttgtcgtgtccagcagtat
cctttcactaacaaacaaacaattcctccaatggactgggaagaccatatttctgaaatt
gcatctgacataatgaaagaacagagccccaaaaggttatttcaagttcgaggaaagctt
tatgacctgctaatcaattgtattcctccggagatcattttgaagagacttctttatgag
ctactgaggaagctagatgcagaactaaagcatgaagtatgtcattgggctgcatattat
gaacatcggatgcgtcttggacagaaggcgatctttcacattgaagcatttgtggccaag
ttcatgagcatttataaatccttccttattgctacttttggctga

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