Phaseolus vulgaris (common bean): 137837333
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Entry
137837333 CDS
T03093
Name
(RefSeq) uncharacterized protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137837333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
137837333
Messenger RNA biogenesis [BR:
pvu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137837333
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
137837333
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
BAR_4
Motif
Other DBs
NCBI-GeneID:
137837333
NCBI-ProteinID:
XP_068502415
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Position
4:13900717..13934930
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AA seq
879 aa
AA seq
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MGASRKLQGEIDRVLKKVQEGIEVFDSIWNKVYDTENANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALVDSRKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPRGKAKSETRDWLNNVVAELESHIDNFEAELEGLSVKKGKSKPPRLIHLETSITRHKA
HVKKCEFILRLLDNDELSPEQVNDVKDFLDDYIERNQEDFEEFNDVDELYSSLPLDKVDS
PEDIVTIPPGLAKVAPVLSLKPLATSASASQTSEQADDTASQDSNSDVGARTPPPKSSTV
SSTATTPAGSFATPVSINVPVPNLSSPPAISSVTPGSNSVRSSLEISSAVTASPFVNQSS
TMKEEEINSFPGRRPSPSLSDVALIRNISRNSLSNQTTNSIPLVSGNMVSSNGPLGSVSS
ASEITKRNILVADDRLGSNGMVSALVSPLSNRMIMPQVARASDGTSSVDSSNAGEGATVS
GRVFSPSAIPGMQWRPGSPFQNQNDVGHVRARTEIVPDQRERYLQKFQQVQQQGQSALLN
MPSFPGGNPKQFSSQQQNPLFQQFNSQSGVGLGLQSSGLSGISSTSLPQPSISIHSPSSQ
QSLLSVVSKDPDVGNSKVDESQQQIFPDDSGTESTASTGISKNFMNEDELKSTYAVDSPA
GGVPTSLPEPVQTSRDIDLSPSQPLQLNQRTGNLGVIGRNSTDLGPVGDNFSALTANSGG
VRDQLYNLQMLEAAHLKLPQPKDSEHPRTYTPKHPTITPPSFPQVQAPIVNNPAFWERVG
LEPYGTDTLFFSFYYQQNTYQQYMAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEYEQG
TYVYFDFHIENDDMQHGWCQRIKTDFTFEYNYLEDEPIV
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgagtcggaaactccagggcgagattgatcgtgttctgaagaaggttcaggaa
ggcatcgaagtcttcgatagcatctggaacaaggtctacgacacggagaatgcgaaccag
aaggagaagttcgaggctgacctgaagaaggagattaagaagctgcagaggtacagggac
cagattaagacatggattcagtccagcgaaatcaaagataaaaaggttagtgcctcgtat
gagcaagctctagtggattcacgcaagcttattgagcgtgaaatggaaagattcaagatc
tgtgagaaggagacaaagacaaaagcattctctaaagaaggcttaggtcaacagcccaaa
actgatcctagagggaaggctaaatcagagacaagggattggttgaacaatgtggttgcg
gaattagaatctcacatcgataactttgaagctgagcttgaaggactttcagtaaaaaaa
ggaaagagcaagccacccagattgatacatctagaaacatcaattactcggcacaaggct
cacgtaaagaaatgtgagtttatcttgaggctactagataatgatgaactaagtccagag
caggtgaatgatgtcaaagatttcttggatgactatatagagcgtaatcaggaggacttt
gaagaatttaatgatgttgatgagttatatagttcattacccctagataaggtggactca
ccggaagatattgtaacaattccccctggtcttgctaaggtggcacctgtgcttagcttg
aagcctttggcaacatcagcttcagcatcacaaacatctgagcaagccgatgatacagct
tctcaggatagcaattctgatgttggtgcaagaactccacctcctaaaagtagtacagtt
agttctactgctacaacaccagcagggagttttgctactcctgtttctataaatgttcca
gtgcctaacttgtcaagtccaccagccatttcttcagtgacacctggttcaaattctgtt
cggagttccttggaaattagtagtgccgtcactgcttcaccttttgtaaatcagtctagc
actatgaaagaggaagagattaatagtttccctggccgaagaccatctccatcactttca
gatgttgcactcataaggaatatcagcagaaacagtctatcaaatcaaacaacaaatagc
atacctcttgtttctggaaacatggtttccagcaatgggcctcttggttcagtttcttca
gcttctgaaataaccaagagaaacatattggttgctgatgatagactcggaagcaatggg
atggtgtcggctcttgtatcccctttaagtaatagaatgattatgcctcaggttgcaagg
gctagtgatggaacttcctcagttgactctagtaatgccggcgaaggtgcaactgtgtct
gggagagttttctccccttctgctattcctggcatgcaatggagacctggaagtcccttc
cagaatcagaatgatgtgggtcatgttcgtgcaagaactgaaatagttcctgatcaaagg
gaaagatatttacagaagttccagcaagtgcaacaacaaggccaaagtgcccttcttaat
atgccatcttttccaggagggaatcccaagcagttttcttctcagcagcaaaatcctctc
ttccagcagttcaattctcagtctggtgtgggacttggactccagtcatcaggtcttagt
ggtatttcttccacctcattaccccagccatccatttctatccattccccatctagccaa
caatcattgctgtcagttgtttctaaagatccagatgttggcaattctaaggttgacgag
tcacagcaacagatttttcctgatgattcggggactgaatctactgctagtactggaatt
agcaagaattttatgaatgaagatgaactgaaatccacgtatgctgtagactctccggca
ggaggagtacctacctctcttccagagcctgttcagacttctagagatattgatttgtct
cccagccaaccattacaattaaatcagcgtactggtaaccttggtgttataggaagaaat
tctactgaccttggacctgttggtgacaactttagtgcattaactgctaattctggtgga
gttcgtgatcagttatataatttgcagatgcttgaggcagctcacctcaaacttccgcaa
cctaaggactcagaacatcccaggacctatactcctaaacatcctacaataactcctcct
agttttcctcaagtacaggcacctattgttaataatcctgccttttgggagagagtgggt
ctagaaccatatggtactgataccctgttcttttcattttactatcaacagaacacttac
caacaatatatggctgcaaaagagctaaagaagcagtcttggagatatcaccgcaagtat
aacacatggtttcaacggcatgaagagccaaaagttgcaacagatgaatatgagcaagga
acatatgtgtactttgatttccatatagaaaatgatgacatgcaacatgggtggtgtcaa
agaatcaagactgacttcacttttgaatataattaccttgaagatgagcctattgtctag
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