KEGG   Phaseolus vulgaris (common bean): 137837333
Entry
137837333         CDS       T03093                                 
Name
(RefSeq) uncharacterized protein
  KO
K12580  CCR4-NOT transcription complex subunit 3
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    137837333
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvu03019]
    137837333
Messenger RNA biogenesis [BR:pvu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     137837333
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     137837333
SSDB
Motif
Pfam: Not3 NOT2_3_5_C DUF5965 BAR_4
Other DBs
NCBI-GeneID: 137837333
NCBI-ProteinID: XP_068502415
LinkDB
Position
4:13900717..13934930
AA seq 879 aa
MGASRKLQGEIDRVLKKVQEGIEVFDSIWNKVYDTENANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALVDSRKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPRGKAKSETRDWLNNVVAELESHIDNFEAELEGLSVKKGKSKPPRLIHLETSITRHKA
HVKKCEFILRLLDNDELSPEQVNDVKDFLDDYIERNQEDFEEFNDVDELYSSLPLDKVDS
PEDIVTIPPGLAKVAPVLSLKPLATSASASQTSEQADDTASQDSNSDVGARTPPPKSSTV
SSTATTPAGSFATPVSINVPVPNLSSPPAISSVTPGSNSVRSSLEISSAVTASPFVNQSS
TMKEEEINSFPGRRPSPSLSDVALIRNISRNSLSNQTTNSIPLVSGNMVSSNGPLGSVSS
ASEITKRNILVADDRLGSNGMVSALVSPLSNRMIMPQVARASDGTSSVDSSNAGEGATVS
GRVFSPSAIPGMQWRPGSPFQNQNDVGHVRARTEIVPDQRERYLQKFQQVQQQGQSALLN
MPSFPGGNPKQFSSQQQNPLFQQFNSQSGVGLGLQSSGLSGISSTSLPQPSISIHSPSSQ
QSLLSVVSKDPDVGNSKVDESQQQIFPDDSGTESTASTGISKNFMNEDELKSTYAVDSPA
GGVPTSLPEPVQTSRDIDLSPSQPLQLNQRTGNLGVIGRNSTDLGPVGDNFSALTANSGG
VRDQLYNLQMLEAAHLKLPQPKDSEHPRTYTPKHPTITPPSFPQVQAPIVNNPAFWERVG
LEPYGTDTLFFSFYYQQNTYQQYMAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEYEQG
TYVYFDFHIENDDMQHGWCQRIKTDFTFEYNYLEDEPIV
NT seq 2640 nt   +upstreamnt  +downstreamnt
atgggcgcgagtcggaaactccagggcgagattgatcgtgttctgaagaaggttcaggaa
ggcatcgaagtcttcgatagcatctggaacaaggtctacgacacggagaatgcgaaccag
aaggagaagttcgaggctgacctgaagaaggagattaagaagctgcagaggtacagggac
cagattaagacatggattcagtccagcgaaatcaaagataaaaaggttagtgcctcgtat
gagcaagctctagtggattcacgcaagcttattgagcgtgaaatggaaagattcaagatc
tgtgagaaggagacaaagacaaaagcattctctaaagaaggcttaggtcaacagcccaaa
actgatcctagagggaaggctaaatcagagacaagggattggttgaacaatgtggttgcg
gaattagaatctcacatcgataactttgaagctgagcttgaaggactttcagtaaaaaaa
ggaaagagcaagccacccagattgatacatctagaaacatcaattactcggcacaaggct
cacgtaaagaaatgtgagtttatcttgaggctactagataatgatgaactaagtccagag
caggtgaatgatgtcaaagatttcttggatgactatatagagcgtaatcaggaggacttt
gaagaatttaatgatgttgatgagttatatagttcattacccctagataaggtggactca
ccggaagatattgtaacaattccccctggtcttgctaaggtggcacctgtgcttagcttg
aagcctttggcaacatcagcttcagcatcacaaacatctgagcaagccgatgatacagct
tctcaggatagcaattctgatgttggtgcaagaactccacctcctaaaagtagtacagtt
agttctactgctacaacaccagcagggagttttgctactcctgtttctataaatgttcca
gtgcctaacttgtcaagtccaccagccatttcttcagtgacacctggttcaaattctgtt
cggagttccttggaaattagtagtgccgtcactgcttcaccttttgtaaatcagtctagc
actatgaaagaggaagagattaatagtttccctggccgaagaccatctccatcactttca
gatgttgcactcataaggaatatcagcagaaacagtctatcaaatcaaacaacaaatagc
atacctcttgtttctggaaacatggtttccagcaatgggcctcttggttcagtttcttca
gcttctgaaataaccaagagaaacatattggttgctgatgatagactcggaagcaatggg
atggtgtcggctcttgtatcccctttaagtaatagaatgattatgcctcaggttgcaagg
gctagtgatggaacttcctcagttgactctagtaatgccggcgaaggtgcaactgtgtct
gggagagttttctccccttctgctattcctggcatgcaatggagacctggaagtcccttc
cagaatcagaatgatgtgggtcatgttcgtgcaagaactgaaatagttcctgatcaaagg
gaaagatatttacagaagttccagcaagtgcaacaacaaggccaaagtgcccttcttaat
atgccatcttttccaggagggaatcccaagcagttttcttctcagcagcaaaatcctctc
ttccagcagttcaattctcagtctggtgtgggacttggactccagtcatcaggtcttagt
ggtatttcttccacctcattaccccagccatccatttctatccattccccatctagccaa
caatcattgctgtcagttgtttctaaagatccagatgttggcaattctaaggttgacgag
tcacagcaacagatttttcctgatgattcggggactgaatctactgctagtactggaatt
agcaagaattttatgaatgaagatgaactgaaatccacgtatgctgtagactctccggca
ggaggagtacctacctctcttccagagcctgttcagacttctagagatattgatttgtct
cccagccaaccattacaattaaatcagcgtactggtaaccttggtgttataggaagaaat
tctactgaccttggacctgttggtgacaactttagtgcattaactgctaattctggtgga
gttcgtgatcagttatataatttgcagatgcttgaggcagctcacctcaaacttccgcaa
cctaaggactcagaacatcccaggacctatactcctaaacatcctacaataactcctcct
agttttcctcaagtacaggcacctattgttaataatcctgccttttgggagagagtgggt
ctagaaccatatggtactgataccctgttcttttcattttactatcaacagaacacttac
caacaatatatggctgcaaaagagctaaagaagcagtcttggagatatcaccgcaagtat
aacacatggtttcaacggcatgaagagccaaaagttgcaacagatgaatatgagcaagga
acatatgtgtactttgatttccatatagaaaatgatgacatgcaacatgggtggtgtcaa
agaatcaagactgacttcacttttgaatataattaccttgaagatgagcctattgtctag

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