Phaseolus vulgaris (common bean): 137838063
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Entry
137838063 CDS
T03093
Name
(RefSeq) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
137838063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvu03400
]
137838063
DNA repair and recombination proteins [BR:
pvu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
137838063
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
137838063
NCBI-ProteinID:
XP_068503384
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Position
4:complement(46656323..46664100)
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AA seq
1081 aa
AA seq
DB search
MHRYYQRITGERPPTAPVVEKLNRHGTAATSQPPPADDVKGTDTPPEKVPRRFLPANFAP
KENKSGPSLFESIMHKFVKVDDNEKITKRSRPLNGSLSKSSQPVGIRADTDREGVHKEEA
VFQPLVKAKNNAGNFKEKANQENTALVVTDDDVAGPETPGVQPLASQVKRSREAGSKFGS
LMNSGKRVRFLDDSMALDMTKKEVEMASKFEWLDPSRIRDANGRRPNNPLYDRTTLYIPP
EVLSKLSASQKQYWSVKCKYMDVVLFFKVGKFYELYEMDADIGHKELDWKITLSGVGKCR
QVGISESGIDDAIQKLVARGYKVGRVEQLETSEAAKARGANSVVRRKLVQVVTPSTNVDG
NIGPDAVHLLAIKEESNGLDNGSVVYGFAFVDCARLRFWVGSIDDDTSCSALGALLMQVS
PKEVIYDSRGLSKEAQKALRKFSLSGSSIQQFTPVQSITDLVNSEIRDLINSKGYFKGSS
DSLDHVLNNVIHREITLSALGGLIGHLNRLMLDDVLQSGDLYPYQVYRGCLKMDGPTMIN
LELFVNNEDGSKSGSLYNCLDKCVTSSGKRLLRNWICCPLIDAEMINNRLDVVDDLMANP
DIVSHIAQHLRKLPDLEHLIGRIKSSLQLSGPLLLPLLGKKILKQRVKVFGSLVNGLRTA
LSLLLLLMKEQPLVSSLTKVFKLPILTGSEGLDQFLIQFEAAVHSDFPNYQNHDVTDSDA
ETLTILAELFLEKAAQWFEVVHAINCIDVLRSFAVTSSFSCGTMSRPIILAASSGTSVDS
GRTVLNMKGLWHPFALGDSGCVPVPNDMALGESEDGSHPRTLLLTGPNMGGKSTLLRSTC
LAVIMAQLGCYVPCESCVLSVVDIIFTRLGAKDRIMTGESTFFIECTETASVLQKATQDS
LVILDELGRGTSTFDGYAIAYAVFRHLIEKVNCRMLFATHYHPLTKEFASHPRVTMQHMA
CAFKSKSDNCSMRDQELVFLYRLAPGACPESYGLQVALMAGIPENTVNIASKASQQMKKS
IGQSFRSSEQRSEFSTLHEEWLKTLVSISRIQDCNSLDDVLDTLICVWYELKTSSVSANP
R
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgcatagatattatcagcgtattaccggtgagcgacctcccaccgctccggtggttgag
aaactcaaccgccacggtactgctgccactagtcaacctccgccggctgacgatgtcaaa
ggaactgatacaccgccggagaaggtgccgcgtcgctttttgccggcgaatttcgcgcca
aaagagaacaaatccggtccctccttgtttgagagcatcatgcacaaattcgtcaaggtc
gacgataacgaaaaaattactaagaggagccgcccattgaatggtagtttgtctaaatct
tctcaaccagtgggaatacgagctgatactgatcgtgaaggggtgcacaaggaagaagca
gtttttcaacctttggtgaaagcaaaaaataatgctgggaatttcaaggaaaaggctaat
caggaaaacactgcactggttgtaaccgatgatgatgttgccggacctgaaaccccaggg
gtgcagcctcttgcttctcaggtgaaacgcagtcgtgaggctggatccaagtttggttcc
ttgatgaattctggcaaacgagtcagatttcttgatgattcaatggcattagacatgact
aagaaggaagtagaaatggccagcaagtttgaatggcttgatccttctcgaatcagggat
gctaatggaagaaggccgaataatcctttgtatgacaggacgacactttatattcctcca
gaagttttgtcaaaactgtcagcatcacaaaaacagtattggagtgtcaaatgtaaatat
atggatgttgtgctattttttaaagtgggaaaattttacgagctttatgaaatggatgct
gacattggccataaggagcttgattggaaaataactttaagtggtgttggaaaatgtcga
caggttggtatatctgaaagtgggattgatgatgccattcaaaagctggttgcacgtggg
tataaggttggacgagtggagcagttagagacatctgaagcagcaaaagctaggggggct
aactcggttgttcggagaaaactagttcaggtagttactccatcaaccaatgttgatggt
aacattggtcctgatgctgttcacctcctcgcaataaaagaggaaagcaatggtttggat
aatggttcagttgtgtatggatttgcttttgttgattgtgctcggctcagattctgggtt
ggctccatagatgatgatacatcctgttcggctttaggggccttattgatgcaagtatca
cccaaggaagttatatacgacagcagagggttgtccaaagaagctcagaaagcacttaga
aaattctcattaagtggttcgtcaatacagcagttcactccagttcagtcaatcactgac
ttggtgaactctgaaattagggatttaattaactcaaagggatacttcaaaggctcatct
gattcactggatcatgtgctaaacaatgtgattcatcgtgaaatcaccttgtctgctctg
ggtggattgattggtcatctgaatagattgatgttagatgatgtcctacagagcggggat
ctgtatccataccaagtttacaggggttgcctgaaaatggatggtccaacaatgataaat
ctagaactctttgtcaataatgaggatggtagcaaatcaggttcattgtacaattgtctt
gataagtgtgtaacttcatctggaaagcggcttcttaggaactggatctgctgtccattg
atagatgctgaaatgatcaacaacaggcttgatgtagtggatgatctaatggccaacccg
gatattgtatcacacattgctcaacatcttcgcaagcttccagacttggaacatttgatt
ggccgaattaagtccagccttcaattatcaggccctctcttactgcccttgttaggaaag
aaaatattgaagcagagggtaaaagtgtttggatcactagtgaatggccttcggactgct
ttgagtttgttgctccttttaatgaaagagcagcctctagtatcatctttgaccaaagtt
tttaaactaccaattctgactggcagtgagggccttgatcaatttcttattcagtttgaa
gcagctgtgcatagtgacttcccaaattaccagaatcatgacgttacagattcggatgct
gaaacactcacaatacttgctgaattatttttggagaaagctgctcagtggtttgaagtg
gttcatgccatcaattgcattgatgtattacgatcttttgctgttacttctagcttttct
tgtggaactatgtctaggccgattatattggcggcatcaagcggaacaagtgttgacagt
ggaagaactgtgctcaacatgaagggactatggcatccatttgcccttggagacagtgga
tgtgtgcctgtcccaaatgatatggcccttggtgagagtgaagatgggtctcatcctcga
actttgctgcttactggaccaaacatgggaggaaagtcaacacttctgcgttccacctgt
ctagctgttattatggcgcagttaggttgttatgtgccctgtgaaagttgtgttctctca
gttgtggatatcatcttcacacgactaggagccaaagatagaatcatgacaggcgagagt
accttctttattgagtgtacagaaactgcttcggtgcttcagaaagctactcaagattct
ctcgttatccttgatgaattgggtcggggaacaagcacttttgatggctatgccattgca
tatgctgtattccggcatctgattgagaaggttaactgtcgcatgctatttgccacacat
taccatccgctcacgaaagagtttgcctctcatccgcgcgttacaatgcaacacatggct
tgtgctttcaagtcaaaatctgataactgttccatgcgtgatcaagaactagttttcctt
tatcgccttgcccccggagcatgtccagagagctatgggttgcaggttgccctcatggct
ggaatcccagaaaatacggtaaacattgcttctaaggccagccaacagatgaaaaaatca
attggacaaagttttaggtcaagcgaacagagatcagagttctccacccttcacgaagaa
tggttgaaaaccttggtctctatctcacgcatacaggattgtaactcgctggatgatgtt
ttggatacattaatctgtgtgtggtatgaactcaaaacttcatcagtatcagccaacccg
agatag
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