Phaseolus vulgaris (common bean): 137838633
Help
Entry
137838633 CDS
T03093
Name
(RefSeq) probable pectate lyase 16
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu00040
Pentose and glucuronate interconversions
pvu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
137838633
Enzymes [BR:
pvu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
137838633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
137838633
NCBI-ProteinID:
XP_068503973
LinkDB
All DBs
Position
4:30148497..30149867
Genome browser
AA seq
352 aa
AA seq
DB search
MNVIDRCWRQNPEWRRHRSQLATCSVGYVGKMINNIGNDLIHYKVTDSSDDPINPKPNTL
RYGTSIIQGKVWITFQKDMHIKLEKPLLISSFTTIDGRGVNIHIADSACLMIFKATNIII
HGIRVHHCKPQPPGIVMGPEGKVISLGQVDGDAIRLVTASKIWIDHNTLYDCQDGLLDVT
RGSTDVTISNNWFKNQDKVMLLGHDDGYVRDQNMKVTVVYNHFGPNCNQRMPRIRHGYAH
VANNFYQGWLQYAIGGSMKPSLKSEANLFVAPSIGNKEVTWRKGNDKGEDRWNFHSIRDV
FENGASFNVTKGRGVQKPNYSKEQNFIVVDAKFVRLLTRSSGVLRYNKNNIY
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttattgatcgatgttggagacaaaatcctgagtggaggagacaccgatctcag
ttagccacatgttctgtgggttatgttggcaagatgataaacaacattggtaatgacctt
attcattataaagttactgactctagtgatgatcctataaaccccaaacccaacactttg
aggtacggaacttctattattcaaggtaaagtgtggatcacatttcaaaaggacatgcac
attaaactagagaaaccccttcttattagtagttttaccaccatcgatggtcgaggtgtt
aacatccacattgctgatagtgcatgcttgatgatctttaaggccaccaatataattatc
catggcattcgagttcatcattgcaaacctcaacctcctgggatcgtaatgggacctgaa
ggaaaagtgatttctttaggccaagtagacggggatgcaataagattggtcaccgcttca
aagatttggattgaccataatacattgtatgattgtcaagatggtttgcttgatgtaaca
cgaggttccactgatgtgactatctctaataattggtttaaaaatcaagataaagttatg
cttcttggacacgatgatggatatgtgagagaccaaaatatgaaggttacagtagtgtac
aaccattttggacctaactgtaatcaacgtatgccaaggattcgccatggatacgcacat
gtagccaacaatttttatcaaggatggcttcaatatgccattggtggaagcatgaaacct
agtctcaaaagtgaagctaacctctttgtagcaccgtcaataggaaataaggaggtaaca
tggagaaagggtaatgataaaggtgaagatagatggaattttcattcaataagggacgtt
tttgaaaatggagcttcctttaatgtaacaaaaggaaggggtgtgcagaaaccaaattat
agcaaagaacaaaattttatagttgtcgatgccaaattcgtgagattgttgacacgttca
tctggtgtattgcgatacaataaaaataatatatattga
DBGET
integrated database retrieval system
