Phaseolus vulgaris (common bean): 4961795
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Entry
4961795 CDS
T03093
Symbol
rpoB, PhvuCp22
Name
(RefSeq) RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
4961795 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvu03021
]
4961795 (rpoB)
03400 DNA repair and recombination proteins [BR:
pvu03400
]
4961795 (rpoB)
Enzymes [BR:
pvu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
4961795 (rpoB)
Transcription machinery [BR:
pvu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
4961795 (rpoB)
DNA repair and recombination proteins [BR:
pvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
4961795 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-GeneID:
4961795
NCBI-ProteinID:
YP_001122806
UniProt:
A4GGA5
LinkDB
All DBs
Position
Pltd:36566..39778
Genome browser
AA seq
1070 aa
AA seq
DB search
MLGSGNEEMSTLPGLNQIQLEGFCRFIDRGLTEGLFKFPKIEDTDQEIEFQLFAETYQLL
EPLINEKDAVYESLTYSAELYVSTGLIWKSSRDIKKQTIFVGNIPLMNSLGTSIVNGIYR
IVINQILQSPGIYYRSELDPNGISVYTGTIISDWGGRLELEIDKKARIWARVSRKQKISI
LILLSAMGSNLSEILENVCYPEIFVSFLNDKDKKKIGSKENAILEFYRQFACVGGDPVFS
ESLWKELQKKFFQQRCELGRIGRRNMNQKLNLDIPQNNTFLLPRDILTAASHLIGMKFGM
ALLDDINHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTP
LTTTYESFFGLHPLSQVLDQTNPLTEIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR
ICPIDTSEGINVGLIGSLAIHARIGIWGAIESPFFEISERSKRIRMLYLSPSIDEYYMVA
TGNSLALTRDIQEEQIVPARYRQEFLTIAWEQVHLRSIYPFQYFSIGASLIPFIEHNDAN
RALMSSNMQRQAVPLSQSEKCIVGTGLECQVALDSGVSAIADHEGNIVYTDTDRIFLFVN
GDTLSIPLTIYQRSNKNTCMHQKPQVHRGKFIKKGQILADGAATVGGELALGKNVLVAYM
PWEGYNSEDAVLISERLVYEDIFTSFHIRKYEIQTHMTSYGSERITNKIPHLEANLLRNL
DKNGIVILGSWVETGDVLVGKLTPQMAKESSYSPEDRLLRAILGIQVSTSKETCLKLPIG
GRGRVIDVRWIQKKGGSSYNPETIRISILQKREIKVGDKVAGRHGNKGIVSKILSRQDMP
YLQDGEPVDMVFNPLGVPSRMNVGQIFECSLGLSGGMLDKHYRITPFDERYEQEASRKLV
FSELYEASKKTSNPWIFEPEYPGKSKIFDGRTGNSFKQPAIMGKTYILKLIHQVDDKIHG
RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIKTRQEVL
GTTIIGGTIPKPTDAPESFRLLVRELRSLAMELNHFLVSEKNFRIHRKEA
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgcttgggagtggaaatgaagaaatgtctacactacctggattgaatcagatacagttg
gaagggttttgtagattcattgatcggggcttaacagaagggctttttaagtttccaaaa
attgaggatacagatcaagaaattgaatttcaattatttgccgaaacatatcaattatta
gaacccttgataaacgaaaaagatgctgtatatgaatcacttacatattctgctgaatta
tatgtatccacgggattaatttggaaaagtagtagagacataaaaaaacaaactattttt
gttggaaacattcctctaatgaattctctgggaacttctatagtaaatggaatatataga
atagtaattaatcaaatattgcaaagtcctggtatctattaccgttcagaattggaccct
aacggaatttcggtctatactggcactataatatcagactgggggggtagattagaatta
gagattgataaaaaagcaaggatatgggctcgtgtgagtaggaaacagaaaatatctatt
ctaattctattatcagctatgggttcgaatttaagcgaaattctagaaaatgtttgttat
cctgaaattttcgtgtctttcctaaatgataaggataaaaaaaaaattgggtcaaaagaa
aatgccattttggagttttatcgacaatttgcttgtgttggcggagatccagtattttct
gaatctttatggaaagaattacaaaaaaaattttttcaacaaagatgtgaattaggaaga
attggtcgacgaaatatgaaccaaaagcttaatcttgatataccccagaacaatacattt
ttgttaccacgagatatattgacagctgcgagtcatttgattggcatgaaatttggaatg
gctctacttgacgatataaatcatttgaaaaataaacgtattcgttccgtagccgatcta
ttacaagatcaatttggattggccttggttcgtttagaaaatatggttagaggaactata
tgtggagcaattagacataaattgataccgactccgcagaatttggtgacgtcaactcca
ttaacaacgacttatgaatctttttttggattacatccattatctcaagttttggatcaa
actaatccattgaccgaaatagttcatgggagaaaattgagttatttgggtcctggagga
ttgacggggcgaactgcgagttttcggatacgagatatccaccctagtcactatggacgc
atttgtccaattgacacgtctgaaggaatcaatgttggacttattggatctctagcaatt
catgcgaggattggtatttggggggccatagaaagtccattttttgaaatatccgagaga
tcaaaaagaatacgcatgctttatttatcaccaagtatagatgaatactatatggtagca
acaggaaattctttggcacttactcgagatattcaggaggaacagattgttccagcccga
tatcgtcaagaatttcttacgattgcatgggaacaggttcatcttcgaagtatttatccc
ttccaatatttttctattggagcttctctgattccttttatcgaacataatgatgcgaat
cgagctttaatgagttctaatatgcaacgtcaagcagttccgctttctcagtccgaaaaa
tgcattgttggaactggattggaatgccaagtagctttagattcaggggtttccgctata
gccgaccacgagggaaacatcgtttatactgatactgacaggatctttttatttgttaat
ggagatactctaagtattccattaacaatatatcaacgttccaacaaaaatacttgcatg
catcaaaaaccccaggttcaccgaggtaaattcatcaaaaagggacaaattttagcggat
ggtgctgctacagttggcggcgaactcgctttgggaaaaaacgtattagtagcttatatg
ccatgggaaggttacaattctgaagatgctgtactcattagtgagcgcctggtttatgaa
gatatttttacttcttttcacatacggaaatatgaaattcagactcatatgacaagctat
ggttctgaaagaataactaataaaattccacatctagaagccaatttactccgaaattta
gacaaaaacggaattgtgatcctcgggtcgtgggtcgaaacgggcgatgttttagtgggt
aaattaacacctcaaatggcaaaagaatcctcatattcccccgaagatagattattacga
gctatacttggcattcaggtatccacttcaaaggaaacttgtctaaaactacccataggt
ggtaggggtcgagttattgatgtgagatggatccaaaaaaaggggggttccagttataat
ccagaaactattcggatttctattttacagaaacgtgaaattaaagtaggagataaagtg
gccgggagacatggaaataaaggtatcgtttcaaaaattttgtctagacaggatatgcct
tatttgcaagacggagaaccggtcgatatggtcttcaatccactaggggtaccttcacga
atgaatgtaggacaaatatttgaatgctcgctcggtttatcaggaggtatgttagataaa
cattatcgaataacaccatttgatgagagatatgaacaagaagcttcgagaaaactagtg
ttttctgaattatatgaagccagtaaaaaaacatctaatccatggatatttgaacccgag
tatcctggaaaaagcaaaatatttgatggaagaacagggaattcttttaaacagcctgct
ataatgggaaagacttatattttgaaattaattcatcaagttgatgataaaatccatgga
cgttccagtggacattatgcacttgttacacaacaaccacttagaggaagggctaagcag
ggaggacaacgggtaggcgaaatggaggtttgggccttggaaggatttggtgttgctcat
attttacaagagatgcttacttataaatctgatcatattaaaactcgccaagaagtactc
gggactacgatcattggaggaacaatacctaaacctacagatgctccagaatcttttcga
ttgctcgttcgagaattacgatctttagctatggaactgaatcatttccttgtatctgag
aagaacttccggattcataggaaggaagcttaa
DBGET
integrated database retrieval system