KEGG   Phaseolus vulgaris (common bean): 4961795
Entry
4961795           CDS       T03093                                 
Symbol
rpoB, PhvuCp22
Name
(RefSeq) RNA polymerase beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    4961795 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvu03021]
    4961795 (rpoB)
   03400 DNA repair and recombination proteins [BR:pvu03400]
    4961795 (rpoB)
Enzymes [BR:pvu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     4961795 (rpoB)
Transcription machinery [BR:pvu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     4961795 (rpoB)
DNA repair and recombination proteins [BR:pvu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      4961795 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RNA_pol_Rpb2_45
Other DBs
NCBI-GeneID: 4961795
NCBI-ProteinID: YP_001122806
UniProt: A4GGA5
LinkDB
Position
Pltd:36566..39778
AA seq 1070 aa
MLGSGNEEMSTLPGLNQIQLEGFCRFIDRGLTEGLFKFPKIEDTDQEIEFQLFAETYQLL
EPLINEKDAVYESLTYSAELYVSTGLIWKSSRDIKKQTIFVGNIPLMNSLGTSIVNGIYR
IVINQILQSPGIYYRSELDPNGISVYTGTIISDWGGRLELEIDKKARIWARVSRKQKISI
LILLSAMGSNLSEILENVCYPEIFVSFLNDKDKKKIGSKENAILEFYRQFACVGGDPVFS
ESLWKELQKKFFQQRCELGRIGRRNMNQKLNLDIPQNNTFLLPRDILTAASHLIGMKFGM
ALLDDINHLKNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVTSTP
LTTTYESFFGLHPLSQVLDQTNPLTEIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR
ICPIDTSEGINVGLIGSLAIHARIGIWGAIESPFFEISERSKRIRMLYLSPSIDEYYMVA
TGNSLALTRDIQEEQIVPARYRQEFLTIAWEQVHLRSIYPFQYFSIGASLIPFIEHNDAN
RALMSSNMQRQAVPLSQSEKCIVGTGLECQVALDSGVSAIADHEGNIVYTDTDRIFLFVN
GDTLSIPLTIYQRSNKNTCMHQKPQVHRGKFIKKGQILADGAATVGGELALGKNVLVAYM
PWEGYNSEDAVLISERLVYEDIFTSFHIRKYEIQTHMTSYGSERITNKIPHLEANLLRNL
DKNGIVILGSWVETGDVLVGKLTPQMAKESSYSPEDRLLRAILGIQVSTSKETCLKLPIG
GRGRVIDVRWIQKKGGSSYNPETIRISILQKREIKVGDKVAGRHGNKGIVSKILSRQDMP
YLQDGEPVDMVFNPLGVPSRMNVGQIFECSLGLSGGMLDKHYRITPFDERYEQEASRKLV
FSELYEASKKTSNPWIFEPEYPGKSKIFDGRTGNSFKQPAIMGKTYILKLIHQVDDKIHG
RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIKTRQEVL
GTTIIGGTIPKPTDAPESFRLLVRELRSLAMELNHFLVSEKNFRIHRKEA
NT seq 3213 nt   +upstreamnt  +downstreamnt
atgcttgggagtggaaatgaagaaatgtctacactacctggattgaatcagatacagttg
gaagggttttgtagattcattgatcggggcttaacagaagggctttttaagtttccaaaa
attgaggatacagatcaagaaattgaatttcaattatttgccgaaacatatcaattatta
gaacccttgataaacgaaaaagatgctgtatatgaatcacttacatattctgctgaatta
tatgtatccacgggattaatttggaaaagtagtagagacataaaaaaacaaactattttt
gttggaaacattcctctaatgaattctctgggaacttctatagtaaatggaatatataga
atagtaattaatcaaatattgcaaagtcctggtatctattaccgttcagaattggaccct
aacggaatttcggtctatactggcactataatatcagactgggggggtagattagaatta
gagattgataaaaaagcaaggatatgggctcgtgtgagtaggaaacagaaaatatctatt
ctaattctattatcagctatgggttcgaatttaagcgaaattctagaaaatgtttgttat
cctgaaattttcgtgtctttcctaaatgataaggataaaaaaaaaattgggtcaaaagaa
aatgccattttggagttttatcgacaatttgcttgtgttggcggagatccagtattttct
gaatctttatggaaagaattacaaaaaaaattttttcaacaaagatgtgaattaggaaga
attggtcgacgaaatatgaaccaaaagcttaatcttgatataccccagaacaatacattt
ttgttaccacgagatatattgacagctgcgagtcatttgattggcatgaaatttggaatg
gctctacttgacgatataaatcatttgaaaaataaacgtattcgttccgtagccgatcta
ttacaagatcaatttggattggccttggttcgtttagaaaatatggttagaggaactata
tgtggagcaattagacataaattgataccgactccgcagaatttggtgacgtcaactcca
ttaacaacgacttatgaatctttttttggattacatccattatctcaagttttggatcaa
actaatccattgaccgaaatagttcatgggagaaaattgagttatttgggtcctggagga
ttgacggggcgaactgcgagttttcggatacgagatatccaccctagtcactatggacgc
atttgtccaattgacacgtctgaaggaatcaatgttggacttattggatctctagcaatt
catgcgaggattggtatttggggggccatagaaagtccattttttgaaatatccgagaga
tcaaaaagaatacgcatgctttatttatcaccaagtatagatgaatactatatggtagca
acaggaaattctttggcacttactcgagatattcaggaggaacagattgttccagcccga
tatcgtcaagaatttcttacgattgcatgggaacaggttcatcttcgaagtatttatccc
ttccaatatttttctattggagcttctctgattccttttatcgaacataatgatgcgaat
cgagctttaatgagttctaatatgcaacgtcaagcagttccgctttctcagtccgaaaaa
tgcattgttggaactggattggaatgccaagtagctttagattcaggggtttccgctata
gccgaccacgagggaaacatcgtttatactgatactgacaggatctttttatttgttaat
ggagatactctaagtattccattaacaatatatcaacgttccaacaaaaatacttgcatg
catcaaaaaccccaggttcaccgaggtaaattcatcaaaaagggacaaattttagcggat
ggtgctgctacagttggcggcgaactcgctttgggaaaaaacgtattagtagcttatatg
ccatgggaaggttacaattctgaagatgctgtactcattagtgagcgcctggtttatgaa
gatatttttacttcttttcacatacggaaatatgaaattcagactcatatgacaagctat
ggttctgaaagaataactaataaaattccacatctagaagccaatttactccgaaattta
gacaaaaacggaattgtgatcctcgggtcgtgggtcgaaacgggcgatgttttagtgggt
aaattaacacctcaaatggcaaaagaatcctcatattcccccgaagatagattattacga
gctatacttggcattcaggtatccacttcaaaggaaacttgtctaaaactacccataggt
ggtaggggtcgagttattgatgtgagatggatccaaaaaaaggggggttccagttataat
ccagaaactattcggatttctattttacagaaacgtgaaattaaagtaggagataaagtg
gccgggagacatggaaataaaggtatcgtttcaaaaattttgtctagacaggatatgcct
tatttgcaagacggagaaccggtcgatatggtcttcaatccactaggggtaccttcacga
atgaatgtaggacaaatatttgaatgctcgctcggtttatcaggaggtatgttagataaa
cattatcgaataacaccatttgatgagagatatgaacaagaagcttcgagaaaactagtg
ttttctgaattatatgaagccagtaaaaaaacatctaatccatggatatttgaacccgag
tatcctggaaaaagcaaaatatttgatggaagaacagggaattcttttaaacagcctgct
ataatgggaaagacttatattttgaaattaattcatcaagttgatgataaaatccatgga
cgttccagtggacattatgcacttgttacacaacaaccacttagaggaagggctaagcag
ggaggacaacgggtaggcgaaatggaggtttgggccttggaaggatttggtgttgctcat
attttacaagagatgcttacttataaatctgatcatattaaaactcgccaagaagtactc
gggactacgatcattggaggaacaatacctaaacctacagatgctccagaatcttttcga
ttgctcgttcgagaattacgatctttagctatggaactgaatcatttccttgtatctgag
aagaacttccggattcataggaaggaagcttaa

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