Phaseolus vulgaris (common bean): PHAVU_001G246000g
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Entry
PHAVU_001G246000g CDS
T03093
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvu03009
]
PHAVU_001G246000g
Enzymes [BR:
pvu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PHAVU_001G246000g
Ribosome biogenesis [BR:
pvu03009
]
Eukaryotic type
Pre-60S particles
Helicases
PHAVU_001G246000g
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
18642450
NCBI-ProteinID:
XP_007163578
UniProt:
V7CZH1
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Position
1:complement(50512380..50517494)
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AA seq
588 aa
AA seq
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MDSDFPNKALTSTRFSDLNPPLSDPVLQALSQSGFDFCTPVQAATIPLLCSFKDVAVDAA
TGSGKTLAFVVPLVEILRRSCSHPKSHQVLGIIISPTRELSTQIYHVAQPFISTLVNVKS
MLLVGGAEVKADINKIEEEGANILIGTPGRLHDIMKRMDVLDFKNLEILILDEADRLLDM
GFQKQITAIISQLPKLRRTGLFSATQTEAIEELSKAGLRNPVRVEVRAETKSENDPSSSK
QPESSKTPSGLHIEYMECEADKKPSQLIDILIKNRSRKIIIYFMTCACVDYWGVVLPGLS
LLKGFSLIPLHGKMKQSAREKALATFTSLSNGILLCTDVAARGLDIPGVDCIVQYDPPQD
PNVFVHRVGRTARLGKQGHAVVFLLPKEESYVEFLRIRRIPLQERICSDGAFDVIPEIRS
AAKKDRDIMEKGIKAFVSYIRAYKEHHCSYILRWKELEIGKLAMGHGLLQLPSMPEVKHH
SLSTDGFEPVEDVNFQDIKYRDKSREKQRKKNLLAKKEAKEKEPKPKKPKKTPDAAVMRK
KTARQRRARQTIEDEEELMQEYRLLKKLKKGTIDENEYAKLTGTEELL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggattccgacttccccaacaaagcgttgacgagcacgcgtttttccgacctgaatccg
ccactttccgaccccgttctccaagccctatcacaatctggcttcgacttctgcacgccg
gtccaagccgccaccattcctctgctctgcagctttaaggacgtcgccgtcgacgccgct
accggttccggaaaaaccctagcctttgtcgtccctctcgtcgagattctgcgccggtcc
tgctctcatcccaagtctcaccaggtgctagggataattatatcccctacaagggagctt
tcgacccaaatatatcatgtggcacaaccattcatttcgacattggtaaatgttaagtcc
atgctcctcgttggtggagcggaagtaaaagcagacataaacaaaatagaggaggaagga
gcaaacatattgatcggcacgcctgggaggttacatgacataatgaagcggatggatgtc
ttggattttaaaaacctcgagattttgattttggatgaggctgatagactcttagatatg
ggattccagaagcagataactgctattatatctcaattgcctaagcttcgtagaactggt
ctattttctgctactcaaactgaggctattgaagagctttctaaggcgggactgaggaac
cctgtgagggttgaagttcgagcagaaactaaatcagaaaatgatccttcgtcatcaaaa
cagccagagtcttcgaaaacaccttcaggacttcacattgagtacatggaatgcgaggca
gataagaagccatcacagctaatagatattcttattaaaaaccgctcaagaaaaattata
atatatttcatgacttgtgcttgtgttgattattggggagttgtccttcctggtctttct
cttttgaaaggtttctccttgattcccctacatggaaagatgaagcagtctgccagggag
aaagcactagcaacatttacatccctttcaaatggaattctgctatgtacggatgttgct
gcacgtggacttgacataccaggtgttgattgtatagtgcagtatgatccccctcaagat
ccaaatgtttttgtacatagagttggtcgaactgctcggctgggaaaacagggtcatgct
gttgtcttcttattaccaaaggaggaatcttatgtagaattcttgcgtataagaagaatt
cctctccaagagagaatatgttctgatggtgcattcgatgttattcctgagattcgttct
gctgccaaaaaagatcgcgatatcatggagaaaggaattaaggcttttgtctcttacatc
cgtgcttataaagagcatcactgctcctatattttaaggtggaaagaacttgaaattggc
aaattggccatgggacatggcttattacaacttccttcaatgccagaggtaaaacatcat
tcactttccactgacggatttgaaccagttgaagatgtcaatttccaggacattaagtac
agggataaatcacgggagaaacaaaggaagaagaacctgctagcaaagaaagaagccaaa
gagaaagagccgaaacctaaaaaaccgaagaaaactccagatgctgctgtcatgcggaag
aaaacagctcgacagagacgtgctcggcagacaatagaagacgaggaggagttgatgcaa
gaataccgattgttgaagaaattgaagaaagggaccatagacgagaatgaatatgccaag
ttgacaggcactgaggaattactttga
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