Phaseolus vulgaris (common bean): PHAVU_002G002400g
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Entry
PHAVU_002G002400g CDS
T03093
Name
(RefSeq) hypothetical protein
KO
K14845
RAT1-interacting protein
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvu03021
]
PHAVU_002G002400g
03009 Ribosome biogenesis [BR:
pvu03009
]
PHAVU_002G002400g
Transcription machinery [BR:
pvu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
PHAVU_002G002400g
Ribosome biogenesis [BR:
pvu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
PHAVU_002G002400g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAI1
Motif
Other DBs
NCBI-GeneID:
18636481
NCBI-ProteinID:
XP_007156600
UniProt:
V7CEM4
LinkDB
All DBs
Position
2:228438..233082
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AA seq
509 aa
AA seq
DB search
MDFTEKDLFGEDSDNDNGSHSSASSSSSSAASSSSSSSSSTSSSKSSEGAADSSSASGSA
SSGAEEDDGNGDVVDSNKAGAYHPHDYEDKDLFDSDNEDYCKTLARSPYPIPVLPATRNA
NNQGRGGFGRGRWQQGYQNDRGAGLLPRPGPYPQRQNFGYGNRFQNGRHDERFVSELKLS
KSEETLSRKCIAFQEPCEIACYSRVEGGEVFFDDRSLRLFKRHITEDVGADLNEGYDTFI
PKKDLGSEGFGDLLACIRDKNVPLQNIHFVTFRNNLNKILATAYIRHEPWEMGVHKRNGV
VYLDVHKLPERPQSDLDRRRCYVGYCFESLATEDPRRADGEGIHHVDANVEFCSVIKTKL
GAHRILMGAEMDCCDSTNEGKRFYVELKTSCELNYHSEERFEREKLLKFWIQSFLAGVPY
IVIGFRDDAGRLVRTERLRTKDITQRVKMKNYWQGGVCLAFADEVLCWLYGTVKEDEDYI
LQFAPPFNRLELLQGQSCPDVIISHLELL
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggatttcacggagaaggacctattcggcgaagattccgacaacgacaatgggtcccac
tcctcagcttcctcttcctcctcctccgccgcttcctcttcctcctcctcgtcatcttcc
acctcttcctctaaatccagcgagggcgccgctgactcctcctccgccagcggcagcgcc
agcagcggcgccgaggaagacgatggtaatggtgacgtcgtagacagcaataaggccggc
gcctatcaccctcacgactacgaagacaaagatctgtttgactccgataacgaagattac
tgtaaaaccctcgccagaagtccttatcctattcctgtattgcctgccacccgcaatgcg
aataatcagggtagagggggctttggccgcggtcgttggcagcaagggtatcaaaatgat
agaggagccggccttcttcctcgtcctggaccctatcctcagaggcagaattttggatac
ggaaataggtttcagaacggtcgccatgatgagcgctttgtctctgagttgaagctttca
aaaagtgaagaaactctgtcaagaaagtgcattgcttttcaggagccttgtgaaattgcc
tgctatagtcgtgtagaaggcggtgaagtattctttgatgatcgaagcttgagacttttt
aagcgccatattactgaggacgttggagctgatttgaatgaaggttatgatacattcatt
cccaaaaaagacttaggctcagagggctttggtgatcttcttgcttgcattagagacaaa
aatgtcccccttcaaaacattcattttgtgacattccgtaacaatcttaacaagatactg
gcaacagcttatatccgccacgagccttgggaaatgggggtgcacaaaaggaatggtgtt
gtctatcttgatgtgcataagttaccagaaagaccacaaagtgatttagaccgtaggaga
tgttatgtaggatattgttttgagagccttgccactgaagatcctagaagagcagatgga
gaagggatacatcatgttgatgccaatgttgaattctgttctgtgattaagacaaaatta
ggagctcaccgcatcttaatgggtgctgagatggattgctgtgattcaactaatgaggga
aagagattttatgtggagttaaagacaagttgtgagttaaattatcattctgaggaaaga
ttcgagagagaaaaactgttgaagttttggattcagtcatttctggcaggtgttccatat
attgtcataggatttagggacgatgcaggtcgtcttgtacggacagaaagacttagaacc
aaagatataactcagagagtaaaaatgaagaactactggcagggaggagtctgcttggct
tttgcggatgaggtattatgctggctttatggaacagtaaaagaagatgaagattacatt
ttgcagtttgctccacctttcaaccgtttggagcttctgcaaggccagtcctgcccagat
gtaattattagtcatttggagctgttgtga
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