Phaseolus vulgaris (common bean): PHAVU_002G034400g
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Entry
PHAVU_002G034400g CDS
T03093
Name
(RefSeq) hypothetical protein
KO
K12876
RNA-binding protein 8A
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03013
Nucleocytoplasmic transport
pvu03015
mRNA surveillance pathway
pvu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PHAVU_002G034400g
09122 Translation
03013 Nucleocytoplasmic transport
PHAVU_002G034400g
03015 mRNA surveillance pathway
PHAVU_002G034400g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
PHAVU_002G034400g
03041 Spliceosome [BR:
pvu03041
]
PHAVU_002G034400g
Messenger RNA biogenesis [BR:
pvu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PHAVU_002G034400g
Spliceosome [BR:
pvu03041
]
Complex C
Other components
EJC/TREX
PHAVU_002G034400g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
Motif
Other DBs
NCBI-GeneID:
18636824
NCBI-ProteinID:
XP_007156991
UniProt:
V7CI74
LinkDB
All DBs
Position
2:complement(3455501..3458529)
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AA seq
202 aa
AA seq
DB search
MQGGAADGEALDFEPEDDDLMDEDGAPDADASPPHPKLKSAITAAATSSLTAPKKTKGRG
FRQDTDANRNTRLSGSDFDSLTTEGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEYG
EIKNLHLNLDRRTGFVKGYALIEYERAEEARNAIENLNGSELLTQTIYVDWAFSSGPINE
SLRRKNARAPRERRSRSPRRRY
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtggcgccgccgacggagaagccttggatttcgagcccgaggacgatgacttg
atggacgaggacggcgctcccgacgccgacgcttctccgcctcaccctaagctcaaatcc
gccatcaccgccgcggccacctcctctctcaccgcccctaagaagaccaagggtcgcggt
ttccgtcaggacaccgacgccaaccgcaacactcgcctctccggctccgatttcgattcc
ctcaccaccgagggtggccctggccctcagagatccattgaaggatggatcattctggtg
accggcgtgcacgaggaagcgcaggaggatgatttgcaaaatgcctttggtgaatacgga
gagattaagaacctgcatttgaatctcgatcgccgcactggttttgtcaaaggttatgca
ctgattgaatatgagcgcgctgaagaagctcgaaacgcaatagagaatttgaatggatct
gagcttcttacccaaaccatttatgttgactgggccttcagcagtggacctattaatgag
tcactcagaagaaagaatgctagagcacctcgtgaacggcgctccaggagcccccggagg
agatattga
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