KEGG   Phaseolus vulgaris (common bean): PHAVU_002G034400g
Entry
PHAVU_002G034400g CDS       T03093                                 
Name
(RefSeq) hypothetical protein
  KO
K12876  RNA-binding protein 8A
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03013  Nucleocytoplasmic transport
pvu03015  mRNA surveillance pathway
pvu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PHAVU_002G034400g
  09122 Translation
   03013 Nucleocytoplasmic transport
    PHAVU_002G034400g
   03015 mRNA surveillance pathway
    PHAVU_002G034400g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvu03019]
    PHAVU_002G034400g
   03041 Spliceosome [BR:pvu03041]
    PHAVU_002G034400g
Messenger RNA biogenesis [BR:pvu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     PHAVU_002G034400g
Spliceosome [BR:pvu03041]
 Complex C
  Other components
   EJC/TREX
    PHAVU_002G034400g
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_3
Other DBs
NCBI-GeneID: 18636824
NCBI-ProteinID: XP_007156991
UniProt: V7CI74
LinkDB
Position
2:complement(3455501..3458529)
AA seq 202 aa
MQGGAADGEALDFEPEDDDLMDEDGAPDADASPPHPKLKSAITAAATSSLTAPKKTKGRG
FRQDTDANRNTRLSGSDFDSLTTEGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEYG
EIKNLHLNLDRRTGFVKGYALIEYERAEEARNAIENLNGSELLTQTIYVDWAFSSGPINE
SLRRKNARAPRERRSRSPRRRY
NT seq 609 nt   +upstreamnt  +downstreamnt
atgcaaggtggcgccgccgacggagaagccttggatttcgagcccgaggacgatgacttg
atggacgaggacggcgctcccgacgccgacgcttctccgcctcaccctaagctcaaatcc
gccatcaccgccgcggccacctcctctctcaccgcccctaagaagaccaagggtcgcggt
ttccgtcaggacaccgacgccaaccgcaacactcgcctctccggctccgatttcgattcc
ctcaccaccgagggtggccctggccctcagagatccattgaaggatggatcattctggtg
accggcgtgcacgaggaagcgcaggaggatgatttgcaaaatgcctttggtgaatacgga
gagattaagaacctgcatttgaatctcgatcgccgcactggttttgtcaaaggttatgca
ctgattgaatatgagcgcgctgaagaagctcgaaacgcaatagagaatttgaatggatct
gagcttcttacccaaaccatttatgttgactgggccttcagcagtggacctattaatgag
tcactcagaagaaagaatgctagagcacctcgtgaacggcgctccaggagcccccggagg
agatattga

DBGET integrated database retrieval system