Phaseolus vulgaris (common bean): PHAVU_004G011600g
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Entry
PHAVU_004G011600g CDS
T03093
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PHAVU_004G011600g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvu03041
]
PHAVU_004G011600g
03009 Ribosome biogenesis [BR:
pvu03009
]
PHAVU_004G011600g
Enzymes [BR:
pvu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PHAVU_004G011600g
Spliceosome [BR:
pvu03041
]
Complex A
U1 snRNP components
U1 related factors
PHAVU_004G011600g
Complex B
PHAVU_004G011600g
Ribosome biogenesis [BR:
pvu03009
]
Eukaryotic type
Pre-60S particles
Helicases
PHAVU_004G011600g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
18631661
NCBI-ProteinID:
XP_007151015
UniProt:
V7BYJ7
LinkDB
All DBs
Position
4:complement(1139583..1144016)
Genome browser
AA seq
757 aa
AA seq
DB search
MAATATASSMGPRYAPPDPTLPKPWKGLVDGKTGYLYYWNPETNVTQYERPSTSAALPKS
SSVPSSSVQVQHVSQGSQRGHSPDFSDRYDRNGSGGSNEAGSRNNQSSKGGSYSSHSVPT
GTNAAASVNYPVKGHGASEAAAVLSPESYRSRHEITVTGDNVPPPLASFGSTGFPPELLR
EVQNAGFAAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFIHLKRCGNNSKMGP
TALVLSPTRELATQIQDEAVKFGKSSRISCACLYGGAPKGPQLRDIDRGADIVVATPGRL
NDILEMRRISLQQVSYLVLDEADRMLDMGFEPQIRKIVNEVPNRRQTLMYTATWPKEVRK
IAADLLVKPVQVNIGNVDELVANKSITQHIEVLPLMEKQRRLEHILRSQDQGSKIIIFCS
TKKMCDQLARNLTRQFGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKDI
RVVVNYDFPTGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKYASDLIKVLEGADQKVPPE
LRDMSLRGGGGMGRSRRWGSGGRGGRGDSGYGGRNNDPGYGGRGDYGGYGGRGSDSNYGG
RGNATGRGGRGFDYDSQRNDRGGSPEKGSRWSDRYKGVNRERSRSPDRAALPQHSQSSFH
KSMMERGGWGGDSDRNKNSSNNRDRSRSPSPYRQERSQRSPVQSFHRSMMGSPRQRPRSP
RSNNTPSKDWYNGEVEEGMIPEEEGIIGPQAQGGGGD
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacagcaactgcctcttcaatgggtccgcggtatgcaccaccagatccgacc
ctccctaaaccatggaagggacttgtggatggcaagactgggtatctttactattggaat
cccgagaccaatgtcacccagtatgagaggccatcgacctcagctgccctgccaaagtct
tcttcagtgcctagctcttctgtccaggttcaacatgtgtctcaagggtcgcaacgtggt
catagtcctgatttcagtgataggtatgatagaaatggcagtggtgggtcaaatgaagct
ggatcacggaataatcagagttccaaaggtggaagttacagttctcatagtgtgccaact
ggaacaaatgctgctgccagtgttaactatcctgtcaaaggtcatggggcatcggaagct
gcagctgtactatctcccgagtcttatcgaagtcgacatgaaataactgtgactggagac
aacgtgcctccacctcttgcatcatttgggtctacaggctttccaccggagcttctgaga
gaggtacaaaatgctggtttcgcagccccaactccaattcaggcacagtcatggcccatt
gctcttcaaagtagagatatagttgccattgcaaaaacaggttcaggaaaaaccttggga
tatttaattcctgcatttattcacctcaagcgctgtggtaataactccaaaatgggcccc
actgcattggttctttcaccaacaagggagttggcaacacaaatacaagatgaggctgtg
aagtttgggaaatcgtcgagaatttcttgtgcatgtttgtatggaggagcaccgaagggt
cctcaactcagagacattgaccgtggagcagatattgtagtagccacacctggtcgcttg
aatgatattcttgagatgagaagaattagtcttcagcaggtctcttatctggtactagat
gaggcagaccggatgctggatatgggtttcgaacctcaaattaggaaaattgttaatgag
gtgcctaatcgcaggcaaacactcatgtatactgcaacgtggccaaaggaggttaggaaa
attgcagctgatctactggtcaaacctgtccaggtgaacattggcaatgtagacgagctt
gttgccaacaagtccattactcagcatattgaagtattgcccctgatggagaaacagaga
cgtctggaacatattttacgttcacaggatcaaggatcaaagataattattttttgttct
accaagaaaatgtgtgatcaacttgctcgtaatttgacacgtcagtttggagctgctgct
atacatggggataaatcccaggctgagagggatcatgtgttgagtcagttccgaactggg
aggtcacctgttcttgtagctacagatgttgctgcacggggacttgatatcaaggacatt
agggtggttgtcaattacgacttccccacaggggttgaagactatgttcataggattgga
aggactgggagagctggagccactgggctagcttacactttctttggtgaccaggatgca
aaatatgcttcagatctcatcaaagttttggaaggtgcagaccagaaagttcctccagaa
cttcgtgatatgtcgttacgtggtggtggtgggatgggaagatccagacgatggggttct
ggtggaagaggtggacgtggtgattctggatatggtggaaggaataatgacccaggatac
ggtggaaggggtgactatggaggatatggtggaagaggtagtgattcaaattatggaggt
agggggaatgctactggcagaggaggccgtggttttgactatgactctcaaaggaatgat
cggggtgggagtccagagaagggatctagatggagtgatcggtacaaaggcgtgaaccgt
gaacgtagtcgtagccctgacagggccgcattacctcaacattcccaaagcagctttcac
aagtcaatgatggaacgtggtggatggggtggtgatagtgatcgcaataagaacagctct
aataatagagatcgaagccgcagtcctagcccctatagacaggagaggagccaacgatcc
ccagttcagagttttcatcgatccatgatgggatccccacggcaacgtccacgcagtcct
aggtctaacaatactccttcaaaagactggtacaatggagaggtggaggaaggcatgatt
ccagaggaagaaggaatcataggtccccaggctcagggtggtggcggcgattag
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