Patella vulgata (common limpet): 126807810
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Entry
126807810 CDS
T09576
Name
(RefSeq) replication factor C subunit 4 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03030
DNA replication
pvul03410
Base excision repair
pvul03420
Nucleotide excision repair
pvul03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126807810
03410 Base excision repair
126807810
03420 Nucleotide excision repair
126807810
03430 Mismatch repair
126807810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvul03032
]
126807810
03036 Chromosome and associated proteins [BR:
pvul03036
]
126807810
03400 DNA repair and recombination proteins [BR:
pvul03400
]
126807810
DNA replication proteins [BR:
pvul03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
126807810
DNA Replication Termination Factors
ELG1-RFC complex
126807810
Chromosome and associated proteins [BR:
pvul03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
126807810
DNA repair and recombination proteins [BR:
pvul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
126807810
Check point factors
HRAD17(Rad24)-RFC complex
126807810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rep_fac_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_lid_RFC1
AAA_assoc_2
AAA_11
AAA_16
AAA_22
Mg_chelatase
AAA_30
AAA_14
SpoIVA_C
RuvB_N
SLFN-g3_helicase
Gp44_lid
AAA_24
Effector_1
AAA_5
DUF815
Cdc6_lid
AAA_19
AAA_7
7TMR-HDED
Motif
Other DBs
NCBI-GeneID:
126807810
NCBI-ProteinID:
XP_050388601
LinkDB
All DBs
Position
1:complement(47727841..47878506)
Genome browser
AA seq
428 aa
AA seq
DB search
MLCFIVAASTTPINGFASRVIPLNWRMKIYIKFYKLVEQNLYPKITNMQAFLKGGSCGLQ
KAKDKPTTSSSKDTTEKRKHTPWVEKYRPRCVEDVAFQDEVVLVLKKSLSGSDLPNLLFY
GPPGTGKTSTILAAARELYGPELFKSRILELNASDERGIDVVRTKVKNFSQLTAAGSRSD
GKPCPPFKIVILDEADSMTGAAQAALRRTMEKQSRTTRFCLICNYVSRIIEPITSRCAKF
RFKPLAQDVLSDRLKLISKKENITLSDEVIQALIDTSEGDLRKAITYLQSASSLHQDETQ
ITQSDIFEISGIVPTETIDDVLKTCQSDSYEKLDTVIKLMINEGYAATQVINQLHDRIVI
SEELTDTQKSVICEKIAIIARKFNRIRRCLLWAGLQRQFDYPYKRQNYHLSYETMQLKVI
INIKSYAV
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgttatgtttcatcgtggctgccagtacaacgcctataaacggcttcgcttcgagagtc
attccattaaattggagaatgaagatatatattaagttttacaaactggtagaacaaaac
ctataccccaagataaccaacatgcaggcttttctaaaaggtggttcatgtggtttacaa
aaagctaaagataaaccaaccaccagttcctccaaagataccacagaaaaacgaaaacat
actccatgggttgaaaaatatcgtccacgatgtgttgaagatgttgcttttcaagatgaa
gttgtattagtcttaaagaaatctttatcaggatcagatttacctaacttgctgttttat
ggacctccaggaacaggaaaaacatcaaccatattagctgctgccagggaattatatgga
cccgaactctttaaatctagaatattggaactgaatgcttctgatgaaagaggtattgat
gttgtccgaaccaaagttaaaaacttttcacagttaactgctgcaggatcaagatcagat
gggaaaccatgtccaccgtttaagatagttatattagatgaagcagattctatgactggt
gcggcacaggctgccttgaggagaacaatggagaaacagtcacgtacaactagattttgt
ttaatatgcaattatgttagtcgcattatagaaccaatcacatcaagatgtgccaagttt
cgttttaaacctcttgctcaggacgtactcagtgatcggttaaaacttatcagtaagaaa
gaaaatattacattaagtgatgaggttatccaagctttaatagatacatcagaaggtgat
ttaagaaaagctatcacctatttacagagtgcctcttccttacaccaagatgaaacccaa
attacacaaagtgatatctttgaaatatcagggattgtaccaacagaaactattgatgat
gttttaaaaacttgtcagtcagattcgtatgaaaaacttgatacggttataaagctaatg
ataaatgaaggttatgctgctacacaagtaatcaatcagttacatgatagaatagttata
tcagaagaattaaccgatacacagaagtcagttatctgtgaaaaaatagcaataattgcc
cgtaaatttaacaggatacggcgatgtttgttgtgggcgggacttcaacgacaatttgac
tacccgtacaagcgccagaattaccatttaagttatgaaacaatgcaattgaaagttata
attaatataaagtcttatgcagtttaa
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